Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2363 ATGGACAACTCAAATCATGCAAGCAAAATTGCCAATGGCCATAGTGCCAAAGATCCAAGAGCTGAAGATGCTGAGCAGCAGCTGGAATTCTCTGAAGATGAGGAAGCACTCATTGCTAGAATGTTCAGATTGGTTGGCCACAGATGGTCTTTGATTGCTGGTAGAATACCTGGAAGAACCGCACAGGAGATTGAAAAGTATTGGACTTCAAAGTGA 216 0.4398 MDNSNHASKIANGHSAKDPRAEDAEQQLEFSEDEEALIARMFRLVGHRWSLIAGRIPGRTAQEIEKYWTSK 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2363 71 Gene3D - 29 71 - -
Alju02g2363 71 ProSiteProfiles Myb-like domain profile. 30 71 IPR001005 -
Alju02g2363 71 Pfam Myb-like DNA-binding domain 29 68 IPR001005 -
Alju02g2363 71 SUPERFAMILY Homeodomain-like 30 69 IPR009057 -
Alju02g2363 71 FunFam MYB-like transcription factor 29 71 - -
Alju02g2363 71 MobiDBLite consensus disorder prediction 1 29 - -
Alju02g2363 71 SMART sant 26 71 IPR001005 -
Alju02g2363 71 CDD SANT 29 68 IPR001005 -
Alju02g2363 71 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 71 IPR017930 -
Alju02g2363 71 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 29 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2363 Alju-ChrAlju02 24386440 24387659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2363 31 70 MYB Transcription Factor Family AT3G13540 65.000 1.55e-13 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju02g2363 Myb_DNA-binding 5.2e-09 CL0123