Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2342 ATGATTTCTTCAATCAAGTACACAACACCTTCACTGAGCTGCTCTGCTTTCTCAACTACAAGCAGAAAGCTTTCTGTTCCAAGGCCTCATTTTTACACACTACCTGTTATTCAGAATGCTCAGCAAAACCCAGAAACTGAATCCTCCATCTCTTCCCAAAAGCCCCTTTACATTTCATCGACTAAGAGCTTCACATTTCTGGCAAATCCCAGAAGGAGGGTTACAGGATGCCAGGCCTATGAGGCAGAGAGGTCACGACCAATTGAGATTAACATTGAACTTCCTGATGAACAGGTTCAGATGGAGGCTGCTCAGAAGCTCAAGATTGGCTTGTATTTTGCTACTTGGTGGGCTTTGAATGTGGTGTTCAATATTTACAATAAGAAGGTTCTCAATGCTTTTCCTTACCCATGGCTTACTTCCACTCTCTCTCTGGCTGCTGGTTCTCTTATGATGTTGATCTCTTGGGCCACAAGAATTGCTGAAGCCCCCAAAGTCGATTTGAATTTTTGGAAGGCCCTGCTTCCTGTGGCTGTGGCCCACACAATTGGGCATGTTGCAGCAACTGTGAGTATGTCAAAAGTTGCAGTTTCATTCACTCACATCATCAAGAGTGGAGAGCCAGCTTTCAGTGTTCTGGTCTCAAGCCTCTTGCTCGGAGAGTCATTCCCTATGCCAGTTTACTTGTCTCTGATTCCAATTATTGGTGGTTGTGTACTTGCTGCAGTCACCGAACTCAACTTCAACATGACTGGTTTTATGGGAGCTATGGTATCAAATTTGGCGTTTGTGTTCCGGAACATATTCTCAAAGAAGGGAATGAAGGGGATGTCAGTTAGCGGAATGAACTACTATGCTTGCCTTTCAATGATGTCTCTATTGATTCTCACACCTTTTGCCATAGCTGTGGAAGGTCCCAAAATGTGGGCTGCTGGCTGGCAAACAGCCATATCTCAGATCGGTCCCAATTTCGTGTGGTGGGTGGTTGCCCAAAGTGTCTTCTACCATTTGTACAATCAAGTGTCTTACATGTCTCTTGATCAAATATCTCCCTTGACATTCAGTGTTGGTAACACAATGAAGAGAATCTCTGTAATTGTCTCTTCCATCCTTATCTTCCACAATCCAGTTCAGCCCGTCAACGCCCTCGGCGCTGCCATTGCAATTCTGGGCACCTTCCTCTATTCACAGATTGACAAGGAAGATGAGGATCTTATGGAGTACATCGGAGTGAACAGTTATCGGTTTTCAATATCATGGGCCAGAATCTTACCCAGCAAATTTGGCAAGGTGAACAAACAAGGCCTTGATTATGATGATCGCCTCATCAATGCTCTTCTTAGAAAAGGAATAGAGCCGTTCGTGACATTAACACACTTTGACATACCCCAGGAGGTTGAAGACAGATATCAATCATGGCTGAGTCCTAAAATTCAGGAGGACTTCAAGTACTATGCAGATATATGCTTTAACAAGTTTGGGGATAGAGTGAAGTATTGGGTTACCATAAACGAGCCTAATGTAGCAGTAATTAGAGGCCCCTTAGCGACTCCTCAGAAAGATAAGTTAGCAGCTGAGAGAGCTCAGTCATTTTTCTTGAACTGGTTCCTGGACCCAATTATATTGGGGAAGTATCCATCAGAAATGAAGGAAATTTTAGGGCAAGACCTGCCAGAATTTTCAAAGTATGAAGTGGAAAAACTCAAGAAAAATGGAATAGAATTCATTGGAGTGAATCACTACACAAGCTATTATGCAAAAGATTGCATCTTTTCTGAGTGTGAACCTGGTTTGGTTCAGGAGCTTCTAAAACTGAAGGTTTTGCCCTTTATGTTCATCACAGGAATGGCATCTTCCTTGGAGATAAGGAAAGGAGCAGATGTGAGAGGGTATTTTGTTTGGTCATTGTTGGACAACTTTGAGTGGAAAGATGGAGAGAGTGTAAGGTTTGGGCTTCATCATGTGGATTATGGCACTCTCAATAGAACAAGAAGACTCTCTGCTTTATGGTACAAATACTTCATTGCTCAAAATCTCCCTCCCAAACCTCCAACACTCTCCATTCTTTAA 2070 0.43 MISSIKYTTPSLSCSAFSTTSRKLSVPRPHFYTLPVIQNAQQNPETESSISSQKPLYISSTKSFTFLANPRRRVTGCQAYEAERSRPIEINIELPDEQVQMEAAQKLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRIAEAPKVDLNFWKALLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSSLLLGESFPMPVYLSLIPIIGGCVLAAVTELNFNMTGFMGAMVSNLAFVFRNIFSKKGMKGMSVSGMNYYACLSMMSLLILTPFAIAVEGPKMWAAGWQTAISQIGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSILIFHNPVQPVNALGAAIAILGTFLYSQIDKEDEDLMEYIGVNSYRFSISWARILPSKFGKVNKQGLDYDDRLINALLRKGIEPFVTLTHFDIPQEVEDRYQSWLSPKIQEDFKYYADICFNKFGDRVKYWVTINEPNVAVIRGPLATPQKDKLAAERAQSFFLNWFLDPIILGKYPSEMKEILGQDLPEFSKYEVEKLKKNGIEFIGVNHYTSYYAKDCIFSECEPGLVQELLKLKVLPFMFITGMASSLEIRKGADVRGYFVWSLLDNFEWKDGESVRFGLHHVDYGTLNRTRRLSALWYKYFIAQNLPPKPPTLSIL 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2342 689 Gene3D Glycosidases 613 685 - -
Alju02g2342 689 SUPERFAMILY (Trans)glycosidases 399 675 IPR017853 -
Alju02g2342 689 Pfam Glycosyl hydrolase family 1 622 678 IPR001360 GO:0004553|GO:0005975
Alju02g2342 689 Pfam Glycosyl hydrolase family 1 514 589 IPR001360 GO:0004553|GO:0005975
Alju02g2342 689 Pfam Glycosyl hydrolase family 1 400 511 IPR001360 GO:0004553|GO:0005975
Alju02g2342 689 Gene3D Glycosidases 391 515 - -
Alju02g2342 689 SUPERFAMILY Multidrug resistance efflux transporter EmrE 299 397 - -
Alju02g2342 689 Pfam Triose-phosphate Transporter family 107 396 IPR004853 -
Alju02g2342 689 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 402 IPR004696 GO:0016020|GO:0022857|GO:0055085
Alju02g2342 689 SUPERFAMILY Multidrug resistance efflux transporter EmrE 150 243 - -
Alju02g2342 689 PRINTS Glycosyl hydrolase family 1 signature 572 586 IPR001360 GO:0004553|GO:0005975
Alju02g2342 689 PRINTS Glycosyl hydrolase family 1 signature 625 642 IPR001360 GO:0004553|GO:0005975
Alju02g2342 689 PRINTS Glycosyl hydrolase family 1 signature 649 661 IPR001360 GO:0004553|GO:0005975
Alju02g2342 689 Gene3D Glycosidases 516 606 - -
Alju02g2342 689 PANTHER GLYCOSYL HYDROLASE 517 588 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2342 Alju-ChrAlju02 24086292 24097010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2342 15 401 Antiporters AT1G61800 76.744 0.0 593