Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2327 ATGCACGGCGACACCACCCACGTACCCATCCACTACCACCACCCCACCGACCAATCCAAACCCATTCGCCGCCGCCACACCGCCCGCTACTACGTGCAGCGCGTCCATGACAGCCTCACCACGCGCGTCTCCAAAGTCCTCTGCGGTATTTTCTTAAGCCTTCTTGCCATTGTAGGTCTCATCGCCTTCATCTTATGGCTTAGCCTGCGCCCGCACCGACCCAGATTCCATATCCATGACTTCTCGGTTCCGGGTCTGGGTCAAGAATCCGGGTTTCAGAACGCCGAGATCCAGTTCTTCGTCACGGCCCGAAACTCCAACCAGCGTATAGTGATTAACTACGAGGCCATGGACGGGACGGTGTATTACAGGGATCAGAATGTCGGAATGACGCCGTTGCTGTTTCCGTTTTCTCAGGAGCCGAAGAACACCACGGACGTGCACGGCGTTTTGAGCGGAGCAACGTTAACGGTGACCAGCCAGCGTTGGGCGGAGTTTCTGAACGATAGGGCTCAGGGGAGCGTGGTGTTCCGTGTGGAAGTGACGTCCACGATTAAGTTTAAGATTAGCTGGTGGCAAAGTAAGAACCATCGGATGCATGCAAATTGTGATGTGGGTGTGGGCCCCGACGGGGGCATATTGAGTACGTACAAAGATAAGAGATGCCCCTTAATCTTATACCATTCATCAGATTTTCTAGTTCTGTTAATAGCAGAAATGGTTGATTCTCCAAAGCTATTCCTTCTTCTTCTCTGCACTATTTCTTTCCTCTCAGGCGTTTCCTTCGCTGACCCACCATTTCAAAATTGTTCAACAAGCAGTAACTACACCAAAGGAAGCTCCTTTCAGAACAACCTTAACAACATCCTCACTTCTCTATCTTCCAACGCTTCAATCTTCAAATCTTACAATGTCTCTTATGGAAAAAACCCAGATACAGTCTATACCCTCTTCATGTGCCTCGACTATGTTTCGAATCAAACATGCCAAGATTGCATAGCCACGGCTTCACAAGACATTCTTAAACTCTGTCCCCAAGCAGAAGAAGCAGTTGTCTGGGAAGAACAATGTCAGCTACAATATTCCAGCAAAAACTTCCTCGGAAAAGTGGATGTCACAGGAAAATTGGGGCTTGATAATCAACAGAATATTTCAGAACCAACGAAGTTTGAGTCTGTGGTTAATGGGTTATTGTATAGTCTTACTGATGAGGTATCTTCTAATGTTTCTGCTGACTTGTATGCTATTGGAGAGGCACCTTTTGAAGAGAAAATAATATATGGGTTAGTTCAGTGTACCAGAGATTTATCAGCTAGTGATTGTGGTATTTGTCTAAAAAGTGCGATAAGTTATCTACCTGTTTGTTGTTATTCCTCAATTGGAGCTAGAGTTTTAAGTCGTAGCTGCTACTTGAGATTTGAATTATATGCATTTTACAATGGTGAACCTGAACCAAATGTTCCATTCACACCAAGTGGCAAAAGTGCAACAAGCAAAACTGGGATGATTATTGGAATTATAGCAGCGACTGGCTCGGCAATAGTGATTTTGAGCTTCTGCTTTTGCTTCCTGAGGAAGAAGAGAACTCAGAAAAGTAAGGGTGGAATATACAGTCATGTGATAGATCTCCATAGCTTTGGGCAGAGAGGTGAAACAGTGTTCCAGAATCACCAGAACTTTCGTGGGAGAAATGACAAGATATCTGAGGATTTGCCTTATTTTGATCTTGAAACTCTGTTTGTTGCTACCAACAACTTTTCTTATTCAAATAAGCTTGGTCAAGGCGGCTTTGGACCTGTTTACAAGGGCGTATTAAGTGATGGCCAGGAAGTAGCAATCAAGAGGCTTTTAACAAGCTCTGAACAGGGCTCAGAGGAATTCATAAACGAGGTTCTGTTGATTCTGAAACTTCAACACAAAAATCTAGTTAGGCTTCTTGGATTTTGTTTAGATGGAGAAGAAATGCTTCTTGTTTATGAATTTCTGCCTAATGGCAGCCTTGATGCCGTCCTTTTCGATCCAAGGCAGCGCGCACGACTAAGTTGGATCAAACGTGTTGATATAATAAGTGGAATAGCAAGAGGGATTCTTTATCTTCATGAAGATTCTCGATTAAAGATAATTCATAGAGATCTAAAAGCAAGTAATATATTATTAGATTATGACATGAATCCAAAAATCTCAGATTTTGGAATGGCAAGAATATTTGCAGGTGCTGAAGGTGAAGCTAATACTGCTACTATAGTTGGCACATATGGATACATGGCTCCAGAATATGCTATGGAGGGACTATATTCCATTAAATCCGATGTGTTCGGTTTTGGAGTGTTATTGATCGAAATCATCACTGGGAGACGCAATGCAGACTTCTATCACTCTAAACACGCTACTAGCCTTTTGGCATATGCATGGCATCTATGGAATGAGGGAAATGCACTGGAATTGATGGACCCTCTAGTAGCTGATTCCTGTCCTGAAGATCAGTTTCTAGTATACATGCATGTTGGATTACTGTGTGTTCAAGAAGATGCATATGACAGACCAACCATGTCTTCTGTTGTTTTAATGTTGAAAAGTCAATCACCAACTCTTGGTCAACCCCAAAGGCCACCCTTCAGTGTGAGAAGAATCATTGATAATGAACAATCCTCAGTCAACATCTTCACAATTTCTGATATAGTGCCCCAGTGA 2691 0.4333 MHGDTTHVPIHYHHPTDQSKPIRRRHTARYYVQRVHDSLTTRVSKVLCGIFLSLLAIVGLIAFILWLSLRPHRPRFHIHDFSVPGLGQESGFQNAEIQFFVTARNSNQRIVINYEAMDGTVYYRDQNVGMTPLLFPFSQEPKNTTDVHGVLSGATLTVTSQRWAEFLNDRAQGSVVFRVEVTSTIKFKISWWQSKNHRMHANCDVGVGPDGGILSTYKDKRCPLILYHSSDFLVLLIAEMVDSPKLFLLLLCTISFLSGVSFADPPFQNCSTSSNYTKGSSFQNNLNNILTSLSSNASIFKSYNVSYGKNPDTVYTLFMCLDYVSNQTCQDCIATASQDILKLCPQAEEAVVWEEQCQLQYSSKNFLGKVDVTGKLGLDNQQNISEPTKFESVVNGLLYSLTDEVSSNVSADLYAIGEAPFEEKIIYGLVQCTRDLSASDCGICLKSAISYLPVCCYSSIGARVLSRSCYLRFELYAFYNGEPEPNVPFTPSGKSATSKTGMIIGIIAATGSAIVILSFCFCFLRKKRTQKSKGGIYSHVIDLHSFGQRGETVFQNHQNFRGRNDKISEDLPYFDLETLFVATNNFSYSNKLGQGGFGPVYKGVLSDGQEVAIKRLLTSSEQGSEEFINEVLLILKLQHKNLVRLLGFCLDGEEMLLVYEFLPNGSLDAVLFDPRQRARLSWIKRVDIISGIARGILYLHEDSRLKIIHRDLKASNILLDYDMNPKISDFGMARIFAGAEGEANTATIVGTYGYMAPEYAMEGLYSIKSDVFGFGVLLIEIITGRRNADFYHSKHATSLLAYAWHLWNEGNALELMDPLVADSCPEDQFLVYMHVGLLCVQEDAYDRPTMSSVVLMLKSQSPTLGQPQRPPFSVRRIIDNEQSSVNIFTISDIVPQ 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2327 896 Pfam Protein tyrosine and serine/threonine kinase 588 855 IPR001245 GO:0004672|GO:0006468
Alju02g2327 896 FunFam Cysteine-rich receptor-like protein kinase 10 375 478 - -
Alju02g2327 896 Gene3D Transferase(Phosphotransferase) domain 1 662 867 - -
Alju02g2327 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672|GO:0006468
Alju02g2327 896 Gene3D - 376 478 IPR038408 -
Alju02g2327 896 Gene3D - 266 366 IPR038408 -
Alju02g2327 896 ProSiteProfiles Gnk2-homologous domain profile. 372 478 IPR002902 -
Alju02g2327 896 Pfam Late embryogenesis abundant protein 101 203 IPR004864 -
Alju02g2327 896 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 268 877 - -
Alju02g2327 896 SUPERFAMILY Protein kinase-like (PK-like) 568 883 IPR011009 -
Alju02g2327 896 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 551 661 - -
Alju02g2327 896 Gene3D Phosphorylase Kinase; domain 1 549 661 - -
Alju02g2327 896 ProSiteProfiles Gnk2-homologous domain profile. 264 366 IPR002902 -
Alju02g2327 896 SMART serkin_6 586 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2327 896 FunFam Cysteine-rich receptor-like protein kinase 28 266 365 - -
Alju02g2327 896 CDD STKc_IRAK 592 858 - -
Alju02g2327 896 ProSiteProfiles Protein kinase domain profile. 586 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2327 896 Pfam Salt stress response/antifungal 270 363 IPR002902 -
Alju02g2327 896 Pfam Salt stress response/antifungal 382 476 IPR002902 -
Alju02g2327 896 FunFam Liguleless narrow1 662 865 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2327 Alju-ChrAlju02 23865892 23871473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2327 263 880 Receptor kinase-like Gene Family AT4G05200 43.079 1.56e-170 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju02g2327 PK_Tyr_Ser-Thr 5.8e-47 CL0016