Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2326 ATGTTTTTCTTCATCATTTCCATCTTATTTCTTCACCATGTCTCAGGTTCAGACCCTCTCTTCACTTGGTGTCCTCCTGAATTCCAAGATTACACACTGAACTCTACATTTCATAACAACCTTGAGCTTCTTCTGGGGTCACTTTCCAGCAACATTTCAGCCTCGGGTTTCTATAACACATCCATTGGAGAAGACCCAGATAAGGTCTATGGACTTGCACTATGCAGAGGAGACATAAATTCAACAATCTGTAAGAATTGTGTTGAGAAAGCAAGCCAAGATATACTCAACAAATGTAAGAGTCAAGACGCTATGATATGGTATGATCTTTGTCAAGTAAGATACTCCTTTCAGATGTTCATTTCAAGGATGGTTTATACTGGTAAGTATCCAGATGAAAATAATCAGGCGAAGAACGTGTCGGATCCTGCTCGGTTCAGCCAGGTTCTGACATACTTAATGAATAACTTGTCCAATGAGGCTGCCTTTGTTCCTTCTAAGAACATGTTTGCTTCTGGGGAAATTGAATTTTCCCAGAAAATTACAATTTATGGTCTAGTACAATGCACAAGAGACATCACTAGAACATTATGCTATAACTGTTTGAATTCTGCTCTAGGAGACCTTGGAGCTTGTTGCTCATCCCGTGAAAGTGGAACAGTTCTTAGTCGAACTTGCAATGTCAGGTTTGGATTATCTCAGTTCTTCAATACTTCTTCTCAGTACCTTGTGGTTTATCCAACTTCTAAAGGAGGGAGATTGAAGACATGGATGCTTGTTCTGATTATATGTGCATCAGTGTTCATATTAGCAGTTCTTACTGGTTTCTGCATTGCTTATTTCCATAAAAAACAAGGGGAAGAGAGAGATGATGAAAAAAGCGAAAAGATGCTACTGCAACAATTGGCGACCCCAAAGAGTGTAACAATTACACAAGATGGAGAATTAATTAGCTCTGAAGAACTTGTGTTCATGAGTTTTGCAACGATGAAGTTAGCCACCGATGACTTTTCTGATTCAAACAAGCTAGGACAGGGAGGTTTTGGTTCTGTGTACAAGGGTGTTCTTCCGGATGGAAATGAAATAGCAGTCAAAAGGTTATCAAGGAAGTCTTGGCAAGGCACAGAAGAATTCAAAAATGAGGTTATTCTGATAGCAAAACTTCAGCATAAGAATCTGGTGAAGCTGTTGGGATGTGGCTTGGAAGGAGAAGAGAAGTTTCTCATATATGAATACATGTCCAATCAAAGCCTTGACAAATTTATCTTTGATTCAGAAAAACGTTCACAGGTTAATTGGAATACATGCTATGGCATTATCCTAGGCATAGCTAGAGGATTACTTTATCTTCACGAAGAGTCAAGGCTTAGGATCATTCATAGGGACTTGAAACCAAACAACATATTGCTTGACCATGACATGGTTGCTAAGATATCAGATTTTGGTATTGCAAGAATTTTTTGTGAAAACCAAAGTACTGCTAATACCAAAAGAGTTGTAGGAACATATGGATATATGGCTCCAGAATATGCAATGGAAGGATTGTTCTCAGTGAAATCTGATATCTTCAGCTTCGGTGTCATCTTACTCGAGATTATTAGTGGAAAAAGAAGTAGTGGCTTTTATGCAACCAAACATGCCTCCACTCTTCTAGCATATGCATGGAAATTATGGAATGAAGGGAAAGAAATGGAGTTTGTGGAACCTCATTTGAAAGAAGCATGTCTTTCTTCAGAAGTTTTAAGGTGCATGAACATAGGACTGTTATGTGTACAGGAAGACCCAGAAGACAGACCCACCATGTCAGATGTTATGGTTCTGTTAGGAAGTGAATCAATGTCTCTTCCACAACCAAAACAACCTGCATTTTCTGTGGGCAGATCAATTAAAGTTGATCCATCATTGATGATAACTTCCTCTGTGAATCATATAATGCTCTCTAGTGTTAAGCCTAGATGA 1959 0.3874 MFFFIISILFLHHVSGSDPLFTWCPPEFQDYTLNSTFHNNLELLLGSLSSNISASGFYNTSIGEDPDKVYGLALCRGDINSTICKNCVEKASQDILNKCKSQDAMIWYDLCQVRYSFQMFISRMVYTGKYPDENNQAKNVSDPARFSQVLTYLMNNLSNEAAFVPSKNMFASGEIEFSQKITIYGLVQCTRDITRTLCYNCLNSALGDLGACCSSRESGTVLSRTCNVRFGLSQFFNTSSQYLVVYPTSKGGRLKTWMLVLIICASVFILAVLTGFCIAYFHKKQGEERDDEKSEKMLLQQLATPKSVTITQDGELISSEELVFMSFATMKLATDDFSDSNKLGQGGFGSVYKGVLPDGNEIAVKRLSRKSWQGTEEFKNEVILIAKLQHKNLVKLLGCGLEGEEKFLIYEYMSNQSLDKFIFDSEKRSQVNWNTCYGIILGIARGLLYLHEESRLRIIHRDLKPNNILLDHDMVAKISDFGIARIFCENQSTANTKRVVGTYGYMAPEYAMEGLFSVKSDIFSFGVILLEIISGKRSSGFYATKHASTLLAYAWKLWNEGKEMEFVEPHLKEACLSSEVLRCMNIGLLCVQEDPEDRPTMSDVMVLLGSESMSLPQPKQPAFSVGRSIKVDPSLMITSSVNHIMLSSVKPR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2326 652 FunFam Uncharacterized protein 413 614 - -
Alju02g2326 652 Pfam Salt stress response/antifungal 29 117 IPR002902 -
Alju02g2326 652 Pfam Salt stress response/antifungal 138 231 IPR002902 -
Alju02g2326 652 ProSiteProfiles Gnk2-homologous domain profile. 19 120 IPR002902 -
Alju02g2326 652 Gene3D - 129 235 IPR038408 -
Alju02g2326 652 Gene3D - 21 120 IPR038408 -
Alju02g2326 652 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 18 120 - -
Alju02g2326 652 Gene3D Transferase(Phosphotransferase) domain 1 413 618 - -
Alju02g2326 652 Pfam Protein tyrosine and serine/threonine kinase 340 606 IPR001245 GO:0004672|GO:0006468
Alju02g2326 652 ProSiteProfiles Protein kinase domain profile. 337 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2326 652 SMART serkin_6 337 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2326 652 FunFam Cysteine-rich receptor-like protein kinase 10 132 235 - -
Alju02g2326 652 ProSiteProfiles Gnk2-homologous domain profile. 128 235 IPR002902 -
Alju02g2326 652 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Alju02g2326 652 Gene3D Phosphorylase Kinase; domain 1 299 412 - -
Alju02g2326 652 CDD STKc_IRAK 343 604 - -
Alju02g2326 652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 301 412 - -
Alju02g2326 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Alju02g2326 652 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 627 - -
Alju02g2326 652 SUPERFAMILY Protein kinase-like (PK-like) 319 607 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2326 Alju-ChrAlju02 23861584 23864295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2326 26 625 Receptor kinase-like Gene Family AT4G23230 42.903 5.74e-171 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju02g2326 PK_Tyr_Ser-Thr 7.5e-49 CL0016