Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2322 ATGGAAGAATGGCCGAGATATCAGATCAAGATTCCGTTAGGCGACCCTGTGCTTTTAAGAACTCGTCGTTTTTACGATACGTTGGGATCTATTTTGAATGATCTGGTAGATGGAGCAGCTGAGGCTCTTGGGAAATCTGATTCCAAGTACGGTGTTCAGCAAGGTGACGCGTCGGGCAACATGACGCTGTACGGCTTGGCTCAGTGCACGCCGTACTTAGCCGCCGGCGACTGCAGGCGGTGTGTCCGGGATGCGATAGAGGATATTACAACGTCGTGTTGCGGAGGTAGCATTGGACAAAGTGTAATGTTGCCCAGTTGCTTTGTTCGCTATGAAACTTATCCATTTTATCAACATTCCGGAACGTCGACACCCTCGCCGACGGCGGCTAACGGAAAAAGCAATAAATTGCGGACACAAATTATTGCAATTATGGTCCCCTCTATTATTGTTCTGGTGGGGATAATCGTTTTGTGCTACTACATGGTACCCACAAATTCAAATTCAAAGAAGAAATCACAAAAAGCCATTGATCTATCAGAAAGCTTTGGGGTTGAAATTATTACCACAATGGATTCCTTGCAAATCGACATGGCTACGATTAAAGTAGCCACGAACAATTTTTCTGAAAGAAGCAGGATTGGCAAAGGTGGATTTGGAGAAGTTTTTAAGGGAGTTCTTCTTAATGGACAAGAGATAGCAGTGAAGAGATTATCAAGAAGTTCTTCGCAGGGAGTTGAAGAATTCAAAAATGAGGTTTTGCTGATAGCTAAACTCCAACATAGAAATTTAGTGAGGCTACTAGGATTCTGTCTTGAAGACGATGAGAAGATACTTGTCTATGAATATGTGCCTAACAAAAGCCTTAATCACTTCCTGTTTGATCCTTTGAAGCAAAGGGAATTAACTTGGGTTGAACGGTTTAAGATTATAAAAGGAATTGCTCGAGGAATCCTATATTTGCATGAAGACTCTCGTCTAAAGATCATACATCGTGATCTTAAACCAAGTAATGTTCTATTAGATAGCAACATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGACTGATAACACTGGACCAGATCGAAGGAAGCACAAATAGGATTGTTGGAACATATGGTTATATATCTCCAGAATATGCCATGCACGGATATTTTTCTATAAAATCCGATGTCTTTAGTTTTGGAGTCATGATGCTCGAGATTATTAGTGGAAGAAAGAATTCTTGTTCTTATGATTCATGTCGCATCGATGATCTCTTGAGCTGCGCTTGGAGAAAATGGAGGGAAGAATCAATAGAAGAATTGATGGATCCAGCAGTGAAAGAATCATATTCTCAACAAGAAGTGTTTAGGTGCATCCAGATTGGTTTATTGTGCGTTCAAGAAAATCCAGATGATAGGCCTACAATGGGAATCGTTGCTTCTTATCTAAGCAACGTTACAGTTGAATTACCATATCCTCTAGAACCTGCATTTTTCATGCAAGGTAGAAGAAGACGAAACAACGTTGAACATGATCCTAATTTTGATCACTCCACCAATTATTCTGTCTCCTCATCCATTAATGAGATGTCTATCAGCAAATTTTTCCCTCGCTAA 1605 0.4056 MEEWPRYQIKIPLGDPVLLRTRRFYDTLGSILNDLVDGAAEALGKSDSKYGVQQGDASGNMTLYGLAQCTPYLAAGDCRRCVRDAIEDITTSCCGGSIGQSVMLPSCFVRYETYPFYQHSGTSTPSPTAANGKSNKLRTQIIAIMVPSIIVLVGIIVLCYYMVPTNSNSKKKSQKAIDLSESFGVEIITTMDSLQIDMATIKVATNNFSERSRIGKGGFGEVFKGVLLNGQEIAVKRLSRSSSQGVEEFKNEVLLIAKLQHRNLVRLLGFCLEDDEKILVYEYVPNKSLNHFLFDPLKQRELTWVERFKIIKGIARGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGMARLITLDQIEGSTNRIVGTYGYISPEYAMHGYFSIKSDVFSFGVMMLEIISGRKNSCSYDSCRIDDLLSCAWRKWREESIEELMDPAVKESYSQQEVFRCIQIGLLCVQENPDDRPTMGIVASYLSNVTVELPYPLEPAFFMQGRRRRNNVEHDPNFDHSTNYSVSSSINEMSISKFFPR 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2322 534 ProSitePatterns Protein kinases ATP-binding region signature. 214 236 IPR017441 GO:0005524
Alju02g2322 534 Gene3D - 19 116 IPR038408 -
Alju02g2322 534 ProSiteProfiles Protein kinase domain profile. 208 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2322 534 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 53 530 - -
Alju02g2322 534 Pfam Salt stress response/antifungal 22 114 IPR002902 -
Alju02g2322 534 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 169 283 - -
Alju02g2322 534 SUPERFAMILY Protein kinase-like (PK-like) 195 514 IPR011009 -
Alju02g2322 534 Gene3D Phosphorylase Kinase; domain 1 166 283 - -
Alju02g2322 534 CDD STKc_IRAK 214 479 - -
Alju02g2322 534 ProSiteProfiles Gnk2-homologous domain profile. 6 116 IPR002902 -
Alju02g2322 534 Gene3D Transferase(Phosphotransferase) domain 1 284 486 - -
Alju02g2322 534 FunFam cysteine-rich receptor-like protein kinase 10 284 486 - -
Alju02g2322 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Alju02g2322 534 Pfam Protein tyrosine and serine/threonine kinase 212 476 IPR001245 GO:0004672|GO:0006468
Alju02g2322 534 SMART serkin_6 208 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2322 Alju-ChrAlju02 23721400 23724415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2322 23 534 Receptor kinase-like Gene Family AT4G05200 46.212 4.80e-159 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju02g2322 PK_Tyr_Ser-Thr 5.3e-47 CL0016