Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2311 ATGACAACAACTGCTCCTATTCTCTTGGCTCTAATTTCACTCATTTCTCATCTTCTCGTTCTCAAAGCCCAGCCTGACTTCTTCTTTCACAAGTGCTTCAATGAAAGTGGTAACTACACAAAACCAAGTGCCTACCACACCAACCTCAATACCCTTCTTTCTAATTTCACTTCTGACACCAAAATTGACTATGGCTTCTACAATTACTCCTATGGTGAAACTCCCAACATAGTTAATGCACTTGGAATGTGCAGAGGAGATGTGAAGCCAGATTCTTGTCGTAGTTGCCTCAAGAATGCCATAACCCTTCTCCCAAATCTTTGTCCATATCAGAAGGAGGCATTTGGGTACTATGATTTATGCATGTTTCGATACGCAAGTCGTCAAATGTTTGGGATCTACCAGGACCATGACTTTAAGGATTATTCTGGCGACCAGACTGATGCAGTAGATGCAAACAAGTACACGGATTCGGCTATTAATCTATTGCGTAGTCTAAAAGAAATAGCTAAAGTTGGTGAAGGCTCTTATCACAAGGTGGCTGCGGGAAATGCAACAGCTGATCAATCTCAAGCTGCGTATGGTCTTGTTCAGTGCACGCCTGATTTGAATGAGCAAGATTGCTTCGACTGTTTGACGGATTCTATTTTTTATATCCCAAATTGTTGTCAGAACAAGGTCGGTGGGAGGGTAATCAGGTTGAACTGCAATATTAGATTTGAGAATTTCCTATTCTTTGATCCTGCACATATTAATTCAATACAATTACATCTGTCTCCTGCTGTTCTTCCTCCATCAACCGATTCAACTTCCTCTCAAGGAGGTAGCAAAAAACCAAGAACTACCATTATTGTAGTGGTGCTGATTGGTGCCCTTGTCGCCGTTCTCATAGTATTCTTCATGATTAGAAGATCAAAGAAAACCCATGGAATTGAAGCTATAAGGAAAGATGCTGATGAAATTAAACCAACTGATCAGATGCTGCAAATCGATCTTAACACCATCAAGCTCGCAACTGATAACTTCTCTGAGGCAAATAAGCTTGGTAAAGGAGGATTCGGGCCTGTGTATAAGGGTCGGCTTCCCGATGGACAAGAAGTTGCTGTGAAAATGTTGTCCAAGCATTCTAGTCAAGGAGATTTAGAATTTAAGACTGAAGTGATGTTATTAGCTAAACTTCACCATCGGAATTTAGTAAGATTACTTGGTTTCTGTTTAGAAAAAACAGAAAAACTACTCATCTATGAATTTCTTCCTAATAAAAGTCTTGATTTCTTCTTATTCGATCCAAACCAGCAAGCTTATTTGAATTGGATAGAACGATTCAAGATTATAAGAGGCATTGCTCGTGGCCTACTTTACCTTCACCAGGATTCGAGATTACGCATTATTCATCGTGATCTCAAAGCAAGTAATATTCTCCTAGATGAAGAATTGAATCCTAAGATATCAGATTTTGGCACTGCACGACTGTTTAAGGTGGATCAAACTCGAAGCAACACTAACAGAATTGTTGGAACCTTTGGCTACATGGCGCCAGAATATGTGTTGTATGGTCAATGTTCAATAAAATCAGATGTCTACAGTTTTGGCATATTGGTTGTAGAGATTATAAGCGGCAAGAAAAACAACAGCACCTTTCATGTTGATAGTACACAGAGTCTGGATCTGCTAAATTTTGTATGGAAAAATTGGAGGGAAGGGACAGCCTCAAGTATAGTAGATCCTGTGTTGAGCAATGGTTCAAGAAATGAAATAATGAGATGCATCCACATTGCATTGCTCTGTGTTCAAGAAAATGCAGCTGATCGGCCAACGATGGCCTCAGTCTCATTTATGTTGAACAGCTTCTCTTCCTCTCTCCCTTTACCTTCAGAACGTCGATTCCTTATGAATTATAGCAGTTCATCTGAGACCATGGCTTTGAGACATGAGAGTTCAGAAACAACAAGATCAAGTGATGAACATGGAAGTAACGCTAATCACCCGTCACGAAATGAGTTATCTATTACAGAACTATATCCTCGCTAG 2031 0.3988 MTTTAPILLALISLISHLLVLKAQPDFFFHKCFNESGNYTKPSAYHTNLNTLLSNFTSDTKIDYGFYNYSYGETPNIVNALGMCRGDVKPDSCRSCLKNAITLLPNLCPYQKEAFGYYDLCMFRYASRQMFGIYQDHDFKDYSGDQTDAVDANKYTDSAINLLRSLKEIAKVGEGSYHKVAAGNATADQSQAAYGLVQCTPDLNEQDCFDCLTDSIFYIPNCCQNKVGGRVIRLNCNIRFENFLFFDPAHINSIQLHLSPAVLPPSTDSTSSQGGSKKPRTTIIVVVLIGALVAVLIVFFMIRRSKKTHGIEAIRKDADEIKPTDQMLQIDLNTIKLATDNFSEANKLGKGGFGPVYKGRLPDGQEVAVKMLSKHSSQGDLEFKTEVMLLAKLHHRNLVRLLGFCLEKTEKLLIYEFLPNKSLDFFLFDPNQQAYLNWIERFKIIRGIARGLLYLHQDSRLRIIHRDLKASNILLDEELNPKISDFGTARLFKVDQTRSNTNRIVGTFGYMAPEYVLYGQCSIKSDVYSFGILVVEIISGKKNNSTFHVDSTQSLDLLNFVWKNWREGTASSIVDPVLSNGSRNEIMRCIHIALLCVQENAADRPTMASVSFMLNSFSSSLPLPSERRFLMNYSSSSETMALRHESSETTRSSDEHGSNANHPSRNELSITELYPR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2311 676 SUPERFAMILY Protein kinase-like (PK-like) 326 648 IPR011009 -
Alju02g2311 676 MobiDBLite consensus disorder prediction 653 668 - -
Alju02g2311 676 Gene3D Phosphorylase Kinase; domain 1 304 417 - -
Alju02g2311 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Alju02g2311 676 Gene3D - 139 245 IPR038408 -
Alju02g2311 676 Gene3D - 25 130 IPR038408 -
Alju02g2311 676 FunFam cysteine-rich receptor-like protein kinase 10 418 621 - -
Alju02g2311 676 MobiDBLite consensus disorder prediction 640 676 - -
Alju02g2311 676 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 130 - -
Alju02g2311 676 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 675 - -
Alju02g2311 676 ProSiteProfiles Gnk2-homologous domain profile. 137 245 IPR002902 -
Alju02g2311 676 Pfam Salt stress response/antifungal 151 242 IPR002902 -
Alju02g2311 676 Pfam Salt stress response/antifungal 32 126 IPR002902 -
Alju02g2311 676 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2311 676 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Alju02g2311 676 CDD STKc_IRAK 348 615 - -
Alju02g2311 676 Gene3D Transferase(Phosphotransferase) domain 1 418 625 - -
Alju02g2311 676 FunFam Cysteine-rich receptor-like protein kinase 10 303 417 - -
Alju02g2311 676 SMART serkin_6 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2311 676 Pfam Protein tyrosine and serine/threonine kinase 345 610 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2311 Alju-ChrAlju02 23494262 23497786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2311 25 676 Receptor kinase-like Gene Family AT4G21410 45.333 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju02g2311 PK_Tyr_Ser-Thr 5.7e-47 CL0016