Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2310 ATGCAAGTTCTTAAGACCAACGCCGCAGATGGTGGCTCTCATCGGAAGGTGGCTGCCGGAAACTCCTCGACCCTATCATCTGGTCAAACTGTACATGGTATGGCTCAGTGCACACCGGATTTAACAGAGCAAGAATGCGACGACTGCTTGGTGAAGGCTATCTCGGACATCCCACTATGTTGTCAGAACAAGGTTGGTGGTAGGGTTATCAAACGGAACTGCAATCTTAGATTTGAGAAGGTCCGGTTCTATGATCCTACAGTTATTGATCCAATACAAGTTCCTCTTCCTCCTTCTACTGACAATAGTCCCTCGGAAGGACCTCCCATTGCACCTAACGTTCCATCTTCCGGAGAAGGAAAAAGCAATAGATCAAGAATAATCATTATCGTTGCTGTGGTGATTGGAGCCTTCATTGTCCTTCTCATCTTGGTTTTCATCTATTTTGCATTTAGGAAATCGAAGAAAACCATTGATAATGAAGCTGAAAAAAAGGATGAAGAAGAAATTGAACAAGCTGATTCTTTACAATTTGACTTTGAAACAATCAGAGTCGCTACAGATAATTTCTCTATTGCAAATAAACTTGGACAAGGAGGATTTGGGCCAGTGTATAAGGGTAAGCTCCGCAATGGACAAGAAGTTGCCGTCAAAAGGTTGTCCATGAATTCTGGACAAGGGGATTTAGAATTCAGGAATGAAGTGTTATTGATGGCCAAGCTCCAACATCGCAATTTAGTAAGGTTACTTGGTTTCTGTTTAGAAGGAATAGAAAGGCTTCTCATATATGAATTTCTTCCCAATAGAAGTCTTGATTACGTATTATTTGATCCAATCCAGCGTACTCATTTGAATTGGGAAGTGCGTTACAAAATTATAGTGGGCATTGCTCGTGGCATTCTTTACCTTCATGAAGATTCAAGATTGCGTATTGTTCATCGTGATCTCAAAGTAAGTAATATTCTTCTAGACAAAGAGTTGAACCCAAAGATAACAGATTTTGGCATGGCGAGATTATTTGATATAGATCAAACTCAAAGCAATACTAGCAAAATTGTTGGAACTTATGGATACATGGCACCGGAATATGCATTGCATGGACAAATATCAACAAAATTAGATGTCTTTAGCTTTGGTATACTGGTTCTTGAGATTATAAGCGGCCAGAAAAATAGTAACGTGATTGACGAGGAGAATATACAAGATCTTTTAAGCTTTGTATGGAAAAATTGGAGGGAAGGGACAACCTCAAACATAGTAGATCCAGTTATAAGCAGTGGTTCAAGGGATGAAATCACGAGGTGTATTCACATCGCATTACTGTGTGTTCAAGAAAATGTAGGAGACAGGCCTACCATGACCTCTGTTGAACTTATGCTAAACAGCTACTCTTCATCTCTCCCTTTACCTTCGAGGCCTCCATGTTTAATGAATTTCAGCAGTACGCTTGAGATGCAACCCAGAGAGGAAAATGAAGGAGAGCAAGTACGTAACTCTGCTCAAGAAGCATAA 1512 0.4028 MQVLKTNAADGGSHRKVAAGNSSTLSSGQTVHGMAQCTPDLTEQECDDCLVKAISDIPLCCQNKVGGRVIKRNCNLRFEKVRFYDPTVIDPIQVPLPPSTDNSPSEGPPIAPNVPSSGEGKSNRSRIIIIVAVVIGAFIVLLILVFIYFAFRKSKKTIDNEAEKKDEEEIEQADSLQFDFETIRVATDNFSIANKLGQGGFGPVYKGKLRNGQEVAVKRLSMNSGQGDLEFRNEVLLMAKLQHRNLVRLLGFCLEGIERLLIYEFLPNRSLDYVLFDPIQRTHLNWEVRYKIIVGIARGILYLHEDSRLRIVHRDLKVSNILLDKELNPKITDFGMARLFDIDQTQSNTSKIVGTYGYMAPEYALHGQISTKLDVFSFGILVLEIISGQKNSNVIDEENIQDLLSFVWKNWREGTTSNIVDPVISSGSRDEITRCIHIALLCVQENVGDRPTMTSVELMLNSYSSSLPLPSRPPCLMNFSSTLEMQPREENEGEQVRNSAQEA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2310 503 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 489 - -
Alju02g2310 503 ProSiteProfiles Protein kinase domain profile. 190 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2310 503 Gene3D Phosphorylase Kinase; domain 1 151 265 - -
Alju02g2310 503 Gene3D - 1 83 IPR038408 -
Alju02g2310 503 Gene3D Transferase(Phosphotransferase) domain 1 266 467 - -
Alju02g2310 503 MobiDBLite consensus disorder prediction 94 111 - -
Alju02g2310 503 MobiDBLite consensus disorder prediction 94 121 - -
Alju02g2310 503 FunFam Cysteine-rich receptor-like protein kinase 17 158 265 - -
Alju02g2310 503 SMART serkin_6 190 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2310 503 Pfam Salt stress response/antifungal 23 80 IPR002902 -
Alju02g2310 503 FunFam Cysteine-rich receptor-like protein kinase 28 266 468 - -
Alju02g2310 503 Pfam Protein kinase domain 192 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2310 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Alju02g2310 503 CDD STKc_IRAK 196 461 - -
Alju02g2310 503 ProSiteProfiles Gnk2-homologous domain profile. 1 83 IPR002902 -
Alju02g2310 503 SUPERFAMILY Protein kinase-like (PK-like) 178 484 IPR011009 -
Alju02g2310 503 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2310 Alju-ChrAlju02 23488616 23492660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2310 4 477 Receptor kinase-like Gene Family AT4G21410 53.814 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju02g2310 Pkinase 5.5e-46 CL0016