Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2279 ATGTCTCTTTCAACGGAGTACTCAGCCGCCGGTTACTTGTTCTGCCGCGAGGATGCCGCCGACGCCTTGTACTCCGGTGAAGATGCCTCGATCTTCCGCCACCCTCCATCACCATCATCTTACCTCCCGCCCTATTCTCCGCCGTCGGATGAGATCACCATCGGCGAACTCATCGACGTAGAGTCACACCTCATGCCGAACCAAGTTTACCTCCACCGCCTCCGTGACTGTCCGAACGACTTCACCAATCGCGACAAGTCCATTAATTGGATCTTCAAGGTGCACGCCCATTACCACTTTCGTCCTGTAACGGCGTTACTCTCCGTCAACTACTTCGACCGTTTCTTATCGTGCTCTTCTTCTCTTCCGCCACCTGGGTGGCCGTTTCATCTATTATCGGTGGCATGCTTGTCTCTTGCGGCGAAAATGGAGGAGCCTCGAATCCCGAACTTGTTAGGTTTGCAAATATTCGATCCAGGCTTCGCATTTGAATCCAAGTCGGTTCAGAGAATGGAGCTCCGGATCTTGTCCCAACTGAACTGGAGATTGCGCTCTGTCACACCCTTCGATTACCTCCATTACTTCTTCTCCCAGCTCCCTGCGTCCTCATCCGATCCTAAACCCGGATCCGAGACCCGGTTCTTCAGAGCCTCCCAGCTCATTCTAACCACCACTCGCGTAATTGATTTCTTGAGATTCGCACCGTCGAGTATTGCAGCTGCCGCGGTGCTCTGTTCAGCCGGCGTAGCCTATGACGGCTACCCGCAACCACTGCCGTGTTTTCATGACAGAATGGACAAAGATATGGTGAGAAGCTGTCATCGACTAATGGAGGCATACGTGGATGCCACGTGTCACAGTGACGAGGCGGCTCCTCCCTCAAGCCCCGTAGGCGTACTCGACGCCGCCACCGCTCATGCCAGCTCCACGACCACCCAAGCCGGCCAACCACGGAGGAAGCGGCTGCGATCCTCTGCGCCGAACGTACAGGCAGGATAG 999 0.5536 MSLSTEYSAAGYLFCREDAADALYSGEDASIFRHPPSPSSYLPPYSPPSDEITIGELIDVESHLMPNQVYLHRLRDCPNDFTNRDKSINWIFKVHAHYHFRPVTALLSVNYFDRFLSCSSSLPPPGWPFHLLSVACLSLAAKMEEPRIPNLLGLQIFDPGFAFESKSVQRMELRILSQLNWRLRSVTPFDYLHYFFSQLPASSSDPKPGSETRFFRASQLILTTTRVIDFLRFAPSSIAAAAVLCSAGVAYDGYPQPLPCFHDRMDKDMVRSCHRLMEAYVDATCHSDEAAPPSSPVGVLDAATAHASSTTTQAGQPRRKRLRSSAPNVQAG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2279 332 SMART cyclin_7 89 177 IPR013763 -
Alju02g2279 332 Pfam Cyclin, C-terminal domain 186 281 IPR004367 -
Alju02g2279 332 SMART Cyclin_C_2 186 309 IPR004367 -
Alju02g2279 332 CDD CYCLIN_AtCycD-like_rpt2 186 277 - -
Alju02g2279 332 SUPERFAMILY Cyclin-like 54 183 IPR036915 -
Alju02g2279 332 ProSitePatterns Cyclins signature. 84 115 IPR006671 -
Alju02g2279 332 Gene3D - 57 247 - -
Alju02g2279 332 Pfam Cyclin, N-terminal domain 57 183 IPR006671 -
Alju02g2279 332 CDD CYCLIN_AtCycD-like_rpt1 83 181 - -
Alju02g2279 332 FunFam D6-type cyclin 67 180 - -
Alju02g2279 332 Gene3D - 67 184 - -
Alju02g2279 332 PANTHER CYCLINS 70 279 IPR039361 -
Alju02g2279 332 MobiDBLite consensus disorder prediction 304 319 - -
Alju02g2279 332 MobiDBLite consensus disorder prediction 291 332 - -
Alju02g2279 332 FunFam D6-type cyclin 181 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2279 Alju-ChrAlju02 22853103 22854982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2279 1 279 Core Cell Cycle Gene Families AT1G70210 40.210 1.99e-57 187