Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2264 ATGGAGGCTTCTGGGAGGATTTCAGAAGAGTGGAGTTCTCTTAGTGGATTGTACACAGCTGAGGAAGCTGATTTTATGAATCAACTGCTTGACGGTAGCAACTGTTCAGTCCCAGAAGAGCTACTATATGGAAATTCAAATTTGGGATTTCCATGTGCGTTTTGGCCTGGTCATGAATCAACAGTTGTGAGCGTCACAGGAATCAATAGCAACACTTCATATTTTCCCTACAATGATGCTAATTCTAATGCTCATTTTTTCAGTTTCTCACAAGGCCGTAGCTCCAGTACTGATAGTGGTGTTGTTAGCTACCGCCCTAATGATCCACTGACCAATTTTGATTCTGTGTCTATGGATTTTTCTTTGGGGGATGACAAAATTGTCCCATATAGTGTTCAAGGCAATGACCATTTGAACCTTCAGATAAATGAAAATACTGATGAAGATTCAGGTCTTCTTGACCCAGTTAAGAGGGTTATTGCTGTTGCTGATAGGGAATGTGAAGAATTAGTTTCTTCTGAACCAGCTGAAATGGGTAAAAGCACCAATCTAGAGAAGTCCGAGAAAAGATCTAGGAGCTTATTGGAGGGACAGAAGAACAAGAGGAATGTTAAATCAAGGAAGAATACAAAATCTGAATCTATAAGCAAAAATGAAGAGGAGAGGAGCTTTCAGAGGCAGAGCTCGAGCAGTTGCTGCTCAGAGGATGATTCCAATGCTTCTCAGGAGCCAAATGTGGGGTCCACTTCAAGTTTAAGTCCTAAAGATTCTGCATCTCTCAAGTCTAATGGCAAATCAATGTCTGCTAAAAGTCCTGCCACTGATCCCCAGAGCGTATATGCAAGAAGAAGAAGAGAAAGAATCAACGAAAGGTTGAGAATCCTACAAAACCTTGTCCCCAACGGAACTAAGGTGGATATAAGCACCATGCTTGAGGAAGCAGTTCAATATGTGAAGTTCTTACAGCTTCAAATAAAGCTTCTGAGCTCTGATGATCTGTGGATGTATGCTCCTATTGCTTACAATGGACTGAATATTGGACTAGACCTTAACATCACACCCACCAAACAACCATAG 1077 0.4132 MEASGRISEEWSSLSGLYTAEEADFMNQLLDGSNCSVPEELLYGNSNLGFPCAFWPGHESTVVSVTGINSNTSYFPYNDANSNAHFFSFSQGRSSSTDSGVVSYRPNDPLTNFDSVSMDFSLGDDKIVPYSVQGNDHLNLQINENTDEDSGLLDPVKRVIAVADRECEELVSSEPAEMGKSTNLEKSEKRSRSLLEGQKNKRNVKSRKNTKSESISKNEEERSFQRQSSSSCCSEDDSNASQEPNVGSTSSLSPKDSASLKSNGKSMSAKSPATDPQSVYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGLNIGLDLNITPTKQP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2264 358 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 106 344 - -
Alju02g2264 358 MobiDBLite consensus disorder prediction 225 275 - -
Alju02g2264 358 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 274 337 IPR036638 GO:0046983
Alju02g2264 358 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 272 321 IPR011598 GO:0046983
Alju02g2264 358 MobiDBLite consensus disorder prediction 181 224 - -
Alju02g2264 358 SMART finulus 278 327 IPR011598 GO:0046983
Alju02g2264 358 FunFam Basic helix-loop-helix transcription factor 273 330 - -
Alju02g2264 358 Pfam Helix-loop-helix DNA-binding domain 282 322 IPR011598 GO:0046983
Alju02g2264 358 Gene3D - 272 329 IPR036638 GO:0046983
Alju02g2264 358 MobiDBLite consensus disorder prediction 169 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2264 Alju-ChrAlju02 22398474 22399963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2264 1 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 41.689 2.36e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g2264 HLH 8.1e-09 No_clan