Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2236 ATGACGAGTGCTTCGGAGCTATTCTACAATCGGAGGTATCGTTTGGGACGAACCTCTGATAATCTCGGGAACGATTCGTTACCCGATAGATACCTTCACCTCGATATCAATAACCGTCGCCATCATCACCATCTACATGATTTCAGTGATGGTGAAACTCTCCGACGGTCCACGCCAACGCGGCGGCTATTTCATCGTTTGTCCTCCACGGAGCAAGAATCAGCCAGACTTGATCTAAGGCATAACCAGTCTCTTTCAAACACGACCAATTCTGCTGAAAATGTTAGCAGTTTCAGGGGCCCTAGAGTGACTGGTAATGACAGGCTACCCATAGCTGTGGTACATGCAAGGGCAAGACTCCTTCAGAGGTTGAGTGCAGCACCTCCCTCCGGAAACAGGCAAAGGGGTAGAGTTTCTCTAGATATTGATGACATGAGGCATACTAACTTCAGGGATGAAGAGAGCAGTGAATCATCAGCTACTGGTTCAGCTGAGGGTTTATTAACTAACTTAACTTTACAAATGGAAAGGACCCAACTCTCACATGAAGGGAACAAAAAACCACCTGGACTCAACCAGGAGGCCATGGACCGTTTGCATGTGGAAATCTTTGGCGTCAGGGAAACACAAACGGAAGAATTGGAATCTAGGGTACTGCAGGATTGTGGCATATGTCTAGAAACTTTTCTGGTGGGAGATAAGCTCATACGCTTGCCATGTGGACACAGATTCCACTCTGTCTGTTTGGATCCATGGGTTCGAAAATGTGGGGATTGCCCATTCTGTAGAAGAGATATTGCAATTGCATACAGTGTAATGTCCGACAATATAGACGAAGAACGAAACGAAGTAAGAGGCCGGAGGGCTGGAAAAAGAGTCGAGTGGGTCAGGCTCGACGACCGGGAGAATCAAAACGAAAGAGATTTGCCTGAAAAAGAAGCAACGCTATGCATACCATGA 960 0.4688 MTSASELFYNRRYRLGRTSDNLGNDSLPDRYLHLDINNRRHHHHLHDFSDGETLRRSTPTRRLFHRLSSTEQESARLDLRHNQSLSNTTNSAENVSSFRGPRVTGNDRLPIAVVHARARLLQRLSAAPPSGNRQRGRVSLDIDDMRHTNFRDEESSESSATGSAEGLLTNLTLQMERTQLSHEGNKKPPGLNQEAMDRLHVEIFGVRETQTEELESRVLQDCGICLETFLVGDKLIRLPCGHRFHSVCLDPWVRKCGDCPFCRRDIAIAYSVMSDNIDEERNEVRGRRAGKRVEWVRLDDRENQNERDLPEKEATLCIP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2236 319 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 176 268 IPR013083 -
Alju02g2236 319 CDD RING-H2_PA-TM-RING 221 263 - -
Alju02g2236 319 PANTHER SI:CH211-59O9.10 65 267 - -
Alju02g2236 319 SUPERFAMILY RING/U-box 221 273 - -
Alju02g2236 319 SMART ring_2 222 262 IPR001841 -
Alju02g2236 319 ProSiteProfiles Zinc finger RING-type profile. 222 263 IPR001841 -
Alju02g2236 319 MobiDBLite consensus disorder prediction 79 101 - -
Alju02g2236 319 Pfam Ring finger domain 221 263 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2236 Alju-ChrAlju02 22092489 22095265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2236 1 267 C3H Transcription Factor Family AT1G49850 38.519 5.02e-37 131