Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2220 ATGATATTCAGCCAGGAAAATGATGATGGTGATGTGAGAGGCAACAAGGAAAAACAAGAAGTAGAAAGTGAAGTAGTGAACAAAAATATTGAAGCAAGTGAACATGAAAATCCAGAAGAACCAGAAGAGTGGTTGAACCTGAGTTTAGGAGGAGGAACACAGGTATCAACAACAACAACAACATCATCAGAATTATCAGAATCACGATCAAGATCATCACCAACAAATGCCAAGATCTTCTCTTGTAACTTCTGCATGAGGAAGTTCTTCAGTTCACAGGCCTTAGGGGGACACCAGAACGCACACAAAAGGGAAAGAGGAGCTGCTAGGAGATATCATCAGACTCAGAAGACGATGATGACCACGACGGCGATGATGATGGGTTTGTCCTTTCGATCACTCGGAGTTCAGCCTCATTCGTTGGTGCACAAGCCTGGTTGCAGAGGAGGAGGAACAAGAATAGTACCACCAAGCTTTCATGGAGGAGGGGCTGGAATAATGGGATTGAAGAACTGTTTCATGCCTCATGATGATGATGTTGATGAAGATGATCATGTGGATTTGGTTTGGCCTGGAAGCTTCCGATTGGATCACCAACAACAAGCTGAGACGCCTAAAGAATCAATCAAGCTGGATCTAGACCTTCGACTGTGA 654 0.4404 MIFSQENDDGDVRGNKEKQEVESEVVNKNIEASEHENPEEPEEWLNLSLGGGTQVSTTTTTSSELSESRSRSSPTNAKIFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYHQTQKTMMTTTAMMMGLSFRSLGVQPHSLVHKPGCRGGGTRIVPPSFHGGGAGIMGLKNCFMPHDDDVDEDDHVDLVWPGSFRLDHQQQAETPKESIKLDLDLRL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2220 217 MobiDBLite consensus disorder prediction 49 75 - -
Alju02g2220 217 Gene3D Classic Zinc Finger 55 132 - -
Alju02g2220 217 MobiDBLite consensus disorder prediction 1 75 - -
Alju02g2220 217 PANTHER ZINC FINGER PROTEIN 4-LIKE 13 217 - -
Alju02g2220 217 MobiDBLite consensus disorder prediction 9 42 - -
Alju02g2220 217 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 107 IPR013087 -
Alju02g2220 217 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Alju02g2220 217 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Alju02g2220 217 Coils Coil 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2220 Alju-ChrAlju02 21872756 21873409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2220 78 195 C2H2 Transcription Factor Family AT1G66140 36.986 4.19e-18 78.6