Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2194 ATGCCCAGATTCCAACACAGCCCTGACATGGCTTTTCAAGTTGTGTTTTGTTTACGGTTGATCGACGACGAATATAGGACAATGGAGGCGTTGCAGGGAGATTTGGATCGGGTTAAGGGTCCATGGAGCCCTGAGGAGGACGAGTTGTTGAGGCAGCACGTGCAACGGCACGGCGCTCGGAATTGGTCGGCGATATGCAAGGCGATCCCCGGACGATCTGGAAAATCATGCCGGCTCCGGTGGTGCAACCAGCTCTCACCGGATGTAGAGCGTGGGGCCTTCACTCCCGAGGAGGACGAGATCATCGTCAAGGCACACGCCAAGTTCGGCAACAAATGGGCCACCATAGCCAAGCTCCTCAATGGCCGTACGGACAACTCCGTCAAAAACCACTGGAACTCGACGTTGAAGCGCAAGTACTCGTCATTGGCCGGCGACGTCGAAGATCCATCGCTCCAACCAGCGAAGAAGCTGGCCGCCGAAGATCGATCTCTGACGATTCCGCCGGTATTAGCAGGTCATTCTTACAGCCGGAGCAGCCAAACTGGATCTGATGTCAGCGATTCCGGTCATCAGGTGGCCTCAAATCCTCCGACTCTGATTCGGCCTGAATCGAGACCACAGGATGCGATCCTGAAGAACGATCTTTCAACAGAACTCACTCTGTCTGTTCCTGGAGCCGATTCGAAGGAGTTATGGATGGTTAAATATTCAGGCCCTGTAGCAGAACATGAGAAGGAATTAACAGAATCGATATTATCATCAACGAAGAAGAAGCACGGTGGAATCACGACATTTGGGCCAGAGTTACTGGCAGTGATGAAGGAGATGATAAGGGAAGAAGTGAGAAATTACATGGCGGCATTGTGA 870 0.5253 MPRFQHSPDMAFQVVFCLRLIDDEYRTMEALQGDLDRVKGPWSPEEDELLRQHVQRHGARNWSAICKAIPGRSGKSCRLRWCNQLSPDVERGAFTPEEDEIIVKAHAKFGNKWATIAKLLNGRTDNSVKNHWNSTLKRKYSSLAGDVEDPSLQPAKKLAAEDRSLTIPPVLAGHSYSRSSQTGSDVSDSGHQVASNPPTLIRPESRPQDAILKNDLSTELTLSVPGADSKELWMVKYSGPVAEHEKELTESILSSTKKKHGGITTFGPELLAVMKEMIREEVRNYMAAL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2194 289 MobiDBLite consensus disorder prediction 169 207 - -
Alju02g2194 289 SUPERFAMILY Homeodomain-like 36 132 IPR009057 -
Alju02g2194 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Alju02g2194 289 PANTHER MYB DOMAIN PROTEIN 55 39 180 - -
Alju02g2194 289 Gene3D - 38 90 - -
Alju02g2194 289 SMART sant 38 87 IPR001005 -
Alju02g2194 289 SMART sant 90 138 IPR001005 -
Alju02g2194 289 ProSiteProfiles Myb-like domain profile. 34 85 IPR001005 -
Alju02g2194 289 Gene3D - 92 163 - -
Alju02g2194 289 CDD SANT 41 83 IPR001005 -
Alju02g2194 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 85 IPR017930 -
Alju02g2194 289 MobiDBLite consensus disorder prediction 173 202 - -
Alju02g2194 289 Pfam Myb-like DNA-binding domain 42 100 - -
Alju02g2194 289 FunFam Transcription factor MYB44 93 139 - -
Alju02g2194 289 FunFam MYB transcription factor 39 90 - -
Alju02g2194 289 CDD SANT 93 136 IPR001005 -
Alju02g2194 289 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2194 Alju-ChrAlju02 21449781 21453050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2194 36 289 MYB Transcription Factor Family AT5G67300 47.122 2.66e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju02g2194 Myb_DNA-bind_6 1.6e-17 CL0123