LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju02g2186	ATGACCCCCACATCGCTTGCTCCTTCACATCACTCTCTTCTTCTTCCCAATCCAACAACAGCAGCAGCAACAATGGATTTTCAAGATTCCTCCTTTCTCCTCGATTCTCTCTACTGTCATGAGCCCAAACTGGAGGACGAACAAGACCAACTTTCAGAGTCTTCATGTGAAACTGCTCTAACCAACAACAACAACAATAATGATTCTCTGTTTCCTCTACTTCTGTTGGAGCAAGATTTGTTCTGGGAAGACGATGACCTCATCTCTCTTTTCACCAAAGAACAGCAACAGCTTCAAGAAACTTCCTCCTCCTCCTTCAATCTGCAATTTTTAGACTCTTCTCTCTCCTTGGCTCGTCGTGAAGCAGTGGAGTGGATTCTTAAGGTGAATGCTCACCATGGCTTCTCTGCTCTTACTTCAACTCTGGCCATTAATTATTTGGATAGATTCATTTTAAGCTTCAATATTGAAATAGAGAAGCCATGGATGATCCAACTGGTTGCTGTTACTTGTCTCTCTTTAGCTGCTAAGGTTGAAGAGACACATCTCCCTCCTCTTCTAGACCTTCAAGTGGAGGATAATACTACCAAGTATGTGTTTGATGGCAAGACGATTCTGAGAATGGAGCTTCTGGTTCTGTCGACCCTGAAATGGAAGATGCACCCGGTGACACCATTATCGTTCTTAGATCACATCATTAGAAGGCTTGGATTGAAAACCCATCTTCACTGGCAATTTCTCAAGCGTTGTGAGCATCTTCTTCTATCAGCACTCTCAGATTCAAGATTCGTGGGCTGTCTTCCTTCTGTGTTGGCTACAGCTACAATGCTTCGTGTTATAGAGCAGATACAGCACAATGATGCAGCCGAGTACAAAAAACAACTCCTGGGTGTGCTTAAAATGAACAAGGAGAAAGTAGAGGAGTGTTATAGGGCAATTCTCGAGGCGTCTGATGGTAAGAATAAAAAGAAGAGAAAGTATGGAGAGAGAGTAATGGAGGGTGGATTTGGGAGTGATGAAGGATCCAACGGTTGGTGGAAAGTGGAGTCATCTTCATCATTATGTTGTTCACCACCACCAGAGTCTCTATTGAAGAGGAACAGACATCATCATCATCAGCAGCAGCAGCAACAACAACAACGTAATAATATGAAGATGTCTCCACTGAATCGGGTTGGGGTTGCAATTGTTGTCTCATCTCCTTGA	1206	0.4337	MTPTSLAPSHHSLLLPNPTTAAATMDFQDSSFLLDSLYCHEPKLEDEQDQLSESSCETALTNNNNNNDSLFPLLLLEQDLFWEDDDLISLFTKEQQQLQETSSSSFNLQFLDSSLSLARREAVEWILKVNAHHGFSALTSTLAINYLDRFILSFNIEIEKPWMIQLVAVTCLSLAAKVEETHLPPLLDLQVEDNTTKYVFDGKTILRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLKRCEHLLLSALSDSRFVGCLPSVLATATMLRVIEQIQHNDAAEYKKQLLGVLKMNKEKVEECYRAILEASDGKNKKKRKYGERVMEGGFGSDEGSNGWWKVESSSSLCCSPPPESLLKRNRHHHHQQQQQQQQRNNMKMSPLNRVGVAIVVSSP	401

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju02g2186	401	CDD	CYCLIN_AtCycD-like_rpt2	223	313	-	-
	Alju02g2186	401	PANTHER	CYCLINS	68	318	IPR039361	-
	Alju02g2186	401	Gene3D	-	112	221	-	-
	Alju02g2186	401	Gene3D	-	222	312	-	-
	Alju02g2186	401	FunFam	D6-type cyclin	103	221	-	-
	Alju02g2186	401	Pfam	Cyclin, C-terminal domain	223	326	IPR004367	-
	Alju02g2186	401	CDD	CYCLIN_AtCycD-like_rpt1	118	218	-	-
	Alju02g2186	401	MobiDBLite	consensus disorder prediction	357	388	-	-
	Alju02g2186	401	SMART	Cyclin_C_2	223	339	IPR004367	-
	Alju02g2186	401	Pfam	Cyclin, N-terminal domain	109	220	IPR006671	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju02g2186	Alju-ChrAlju02	21374688	21376148	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju02g2186	28	315	Core Cell Cycle Gene Families	AT4G34160	57.093	3.83e-109	323

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