Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2178 ATGGACACCATATCTTTGTCTGTTCTTTCATTCTTATTACTATCTTCTTCCTTCTTCCACTCTTCACTCTCAGCTTTTTCTTATGACCACCCTCCTCCCGCCTACTACCACCACCCTCCGCCCCCTCCGCCGTTGACCCGGCTGGAGAGAGCACGCCGTGTTCTTCTGAAATTCGCCGACACAATCGACGACCCCAATTACTTTACCAGCAACTGGCATGGCCCCAACCCATGTGAGTACAGAGGAGTTAAATGTGCTAAGTATCCAAATTCATATGAGCAAGCCGTTTCAGGATTAGATTTCAACCAAGCTGGTTTCTCTCCTCGTCAAGGTTCAAACTTGGACCTCTCAGGAATCCTGGGAATCCCAGAATTAACATTCTTCCATGTCAACTCGAACAATTTCTCTGGACAAATCCCCACACAAATCACTAAATACCCATATTTCTACGAGCTCGACTTAAGCAACAACAAGCTCCAAGGTGAATTCCCAAGAGATGTTCTTTCTTCAAATCAACTACTTTTCGTTGATCTCAGGTACAATAACCTCACTGGACCAGTCCCTCCAGAACTATTCAACATGGATCTAGACGTCATCTTTATCAACACCAACAAATTCAGCAGCAACCTTCCATGGAATTTCGGAAACACACCTGCGAGATACCTCACATTCGCCAACAACAAATTCACAGGACCAATCCCAAGTAGCATAGGAAATGCATCAAAAACCTTAACCGAAGTTCTGTTCTTGAGAAACCAATTTTCTGGGTGTTTACCTTACGAGATTGGGTTCCTGAAAAAGGCCGTAGTCTTTGATGTGAGCAACAACACATTGACGGGTCCAATCCCAGAATCTTTCGCTTGCTTAAACAAGATTCGGTTCTTGAATCTAGCTCACAACATATTCTATGGTCCTGTTCCAGAATCAGTGTGCGAGCTTTCTGGGATTCGCAACAATGGGAATCTTACGTTGAGGGATAATTATTTCACAGAAGTTGGACCTAAATGCAAGAAGTTGATTAAGTCAAAGGTGCTTGATGTGAGTAAGAATTGCATAAAGGGGCTTCCCAATCAGAAATCACATGAAGAATGTTACAAGTTTTTGTCTTATGTGAAGCCATGTCCCAATGAATGGTCTCTCAAGGTTGTTCCATGCAAGAAACACAATCCCAAGTACGATGAAACGGCCCCGCCTCCTGCGCCTGTGACCTACGAGGCTCTGCAGCCAACACGCCGACATCGTTTAATGTGA 1251 0.4436 MDTISLSVLSFLLLSSSFFHSSLSAFSYDHPPPAYYHHPPPPPPLTRLERARRVLLKFADTIDDPNYFTSNWHGPNPCEYRGVKCAKYPNSYEQAVSGLDFNQAGFSPRQGSNLDLSGILGIPELTFFHVNSNNFSGQIPTQITKYPYFYELDLSNNKLQGEFPRDVLSSNQLLFVDLRYNNLTGPVPPELFNMDLDVIFINTNKFSSNLPWNFGNTPARYLTFANNKFTGPIPSSIGNASKTLTEVLFLRNQFSGCLPYEIGFLKKAVVFDVSNNTLTGPIPESFACLNKIRFLNLAHNIFYGPVPESVCELSGIRNNGNLTLRDNYFTEVGPKCKKLIKSKVLDVSKNCIKGLPNQKSHEECYKFLSYVKPCPNEWSLKVVPCKKHNPKYDETAPPPAPVTYEALQPTRRHRLM 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2178 416 SUPERFAMILY L domain-like 50 353 - -
Alju02g2178 416 Pfam Leucine rich repeat N-terminal domain 51 85 IPR013210 -
Alju02g2178 416 Gene3D Ribonuclease Inhibitor 220 372 IPR032675 -
Alju02g2178 416 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 7 399 - -
Alju02g2178 416 Gene3D Ribonuclease Inhibitor 48 219 IPR032675 -
Alju02g2178 416 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 211 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2178 Alju-ChrAlju02 21286712 21287962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2178 11 374 Leucine-rich Repeat extension Gene Families AT3G22800 41.192 2.05e-78 248