Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2177 ATGGACACCATCATCATCTCTTTCTTTGTCCTTTCATTCTTATTATTATCTTCTTCCTTCCTTTACTCTTCACTCTCTGTTTTTTCTGCAGAGCTCCCTCGCTCTGAAAGAGAAGCATTACAGAGCATCAACGGAGAAGCAGGGGATAATGCCCCTGCTCCTTCCCCTGACGGCGGCGACGACCCTCCTCCGGCCAACTGCGGATGCACCCCTTCGCCGCCTCCGCCGCCGCTGTCTCTCCGTCTGCTGAAAGCACGCCTTGTGCTTCTGCAATTCGCCGCCACAATCGAAGACCCCACCGGCTTCACCAAAAACTGGAAGGAAGGTGTCAGCCCTTGTGATTACAGAGGAGTTAGATGCGATAAGTATCCAAATTCAGATGAACTAGCGGTTTCAGGATTAGATTTCAACCAAGCTGGTTTCTCTCCTCGTCAAGGTTCATGCTTGGATCTCACTCAAATCCTCGGAATCCCCGAACTAACATTCTTCCATGTCAACTCCAACAACTTCACAGGATCAGTCCCCAAAGAAATCACTAAATACCCATTTTTCTACGAGCTCGATCTGAGCAACAACAAGCTCGAAGGTTATTTCCCATGGCAAGTTCTATTTGCCGAGCAACTCATTTTCTTAGATCTCAGGTTCAATAACCTCATAGGACCGGTCCCACCATCACTCTTCTTTCTTGATCTAGATGTCATCTTCATCAACAACAACAACTTCTTCGGATACCTTCCATGGAATTTCGGCTTCACACCAGCGAGATACCTCACATTCGCCAACAACAAGTTCATCGGACCGATCCCAAGAAGCATAGGTTTAGCTTCAAAAACCTTAACGGAAGTTCTGTTCTTGGGAAACCAGTTTTCTGGGTGCTTGCCTTTTGAAATTGGGTTCCTGAAAAACGCGGTAGTTTTCGATGTGAGCAAGAACTCGTTGACGGGTCCAATCCCAGAATCTTTCGCTTGCTTAGAGAAGATTCGGTTCTTGAATTTAGCTAACAACAGATTCTACGGTGCTGTGCCGGAATCTGTGTGCGAGCTTCCCGGGATTCGGACTGACGGTAATTTTTCCTTGGCGGGGAATTATTTTACTGTAGTTGGACCTGAATGTAGGAAGCTGATAAAATCGAAGGTGCTTGATGTGAGCCAGAATTGCATAAAGGATCTTCCTAATCAGAGATCGCCTGAAGAATGTAGAAAGTTTTTGTCTTGTGTGAAGCCATGTCCGAATGCGTGGTCTCTTACTTATGTTCCATGTAAGAAGTGCCATTATTCTAAGCACGTTGATACGCCTTCTTCGCCTCCTGCTCCCGTCAGTTACGAGGCGCTCAAGCCAATACGGCATCGTTTAATGTGA 1359 0.4665 MDTIIISFFVLSFLLLSSSFLYSSLSVFSAELPRSEREALQSINGEAGDNAPAPSPDGGDDPPPANCGCTPSPPPPPLSLRLLKARLVLLQFAATIEDPTGFTKNWKEGVSPCDYRGVRCDKYPNSDELAVSGLDFNQAGFSPRQGSCLDLTQILGIPELTFFHVNSNNFTGSVPKEITKYPFFYELDLSNNKLEGYFPWQVLFAEQLIFLDLRFNNLIGPVPPSLFFLDLDVIFINNNNFFGYLPWNFGFTPARYLTFANNKFIGPIPRSIGLASKTLTEVLFLGNQFSGCLPFEIGFLKNAVVFDVSKNSLTGPIPESFACLEKIRFLNLANNRFYGAVPESVCELPGIRTDGNFSLAGNYFTVVGPECRKLIKSKVLDVSQNCIKDLPNQRSPEECRKFLSCVKPCPNAWSLTYVPCKKCHYSKHVDTPSSPPAPVSYEALKPIRHRLM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2177 452 Gene3D Ribonuclease Inhibitor 252 429 IPR032675 -
Alju02g2177 452 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 434 - -
Alju02g2177 452 SUPERFAMILY L domain-like 84 387 - -
Alju02g2177 452 Pfam Leucine rich repeat N-terminal domain 86 121 IPR013210 -
Alju02g2177 452 Gene3D Ribonuclease Inhibitor 84 251 IPR032675 -
Alju02g2177 452 MobiDBLite consensus disorder prediction 56 72 - -
Alju02g2177 452 MobiDBLite consensus disorder prediction 45 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2177 Alju-ChrAlju02 21273321 21274679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2177 81 404 Leucine-rich Repeat extension Gene Families AT3G24480 41.641 6.04e-70 228