Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2164 ATGGAGCCATCGCAGCATCAAGCCCTTGAACAAGTTCAGTGCTTCGGCCGCAAGAAGACTGCTGTGGCCGTCACCTACTGCAAGCGTGGCCGTGGCCTCATCAAGATCAATGGCTGCCCGATTGAGTTGGTTCAGCCGGAGATCCTCCGATTCAAGGCATTCGAGCCGATCCTTCTCTTGGGAAAGCACCGATTTGCCGGCGTCGACATGAGAATCCGTGTCAAAGGAGGTGGTCACACCTCGCAGATTTACGCAATCAGACAGAGTATTGCCAAAGCCCTTGTGGCGTTTTACCAGAAGTACGTTGACGAGCAGAGCAAGAAGGAGATAAAAGACATCCTTGTAAGGTACGACAGAACCTTGCTGGTTGCTGATCCCAGGCGATGCGAGCCTAAGAAGTTCGGTGGTCGTGGTGCTCGTGCAAGATTCCAGAAGTCCTACCGTTGA 447 0.5324 MEPSQHQALEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVQPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2164 148 ProSitePatterns Ribosomal protein S9 signature. 76 94 IPR020574 GO:0003735|GO:0005840|GO:0006412
Alju02g2164 148 Gene3D - 3 148 IPR014721 -
Alju02g2164 148 PANTHER RIBOSOMAL PROTEIN S9 7 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
Alju02g2164 148 SUPERFAMILY Ribosomal protein S5 domain 2-like 11 148 IPR020568 -
Alju02g2164 148 Pfam Ribosomal protein S9/S16 16 148 IPR000754 GO:0003735|GO:0005840|GO:0006412
Alju02g2164 148 FunFam 40S ribosomal protein S16 5 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2164 Alju-ChrAlju02 21116566 21117012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2164 8 148 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 90.780 5.11e-94 266