Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2157 ATGTCTGCAGATAGAGAACAAGAGAGGAAGAAGCACATAATGGAGAAGCTAGCCATGAACCCTGCAGCTCAAAAGCATAATAATGAGACTTCAAACACAAGAGGGAAGGAGAAGGGTGGTGTTACTAATAGTACTGATGAAATGGATAATGCTGAGAAGGAGAGGCGTCAGAAAGTTAAATCCTTGTTTGCTCACCTTCATGCTATGCTCCCTCATGTTCCCCCTCAGGCGGACAAAGTAACAGTAGTGGATGAAACAATGAACTACATAAGAATATTGGAGCAAACTCTGAAAAACCTTGAACAGAAGAAGCTTCAACGACTTCACTCTAATGCTGGAACTTCAAGAGAGGCCTTCATAGCTGAACATGTAGCTTCCTCCTCCTCATCCACTTCAAGCCCCCCACTTAATAATCAAAACCCAGAAGTAAAGTTCCAAACTTGGACTTCTCCTAATGTGGCAGTCAACATTTCTGGCCAACAAGCTCAATTTAGTGTTTGCTCCAACAAGAATAATCCCTGCCTTTTCACCACCATCTGCTGTGTTCTTGAGAAGTACAAGATTGATGTTTTGTCTGCCCACATCTCATGTGACAACAATAATCGCAGGTTCTATATGTTTCAGGCTCAAATGAGCAAAGATTTGAATCAGCCTCCAACTTCATTATCAGCAGAGGAAACATTCAAGCAAGCTGCTGCTGAAATTATTCAGCGTCTCTCTTGA 723 0.4219 MSADREQERKKHIMEKLAMNPAAQKHNNETSNTRGKEKGGVTNSTDEMDNAEKERRQKVKSLFAHLHAMLPHVPPQADKVTVVDETMNYIRILEQTLKNLEQKKLQRLHSNAGTSREAFIAEHVASSSSSTSSPPLNNQNPEVKFQTWTSPNVAVNISGQQAQFSVCSNKNNPCLFTTICCVLEKYKIDVLSAHISCDNNNRRFYMFQAQMSKDLNQPPTSLSAEETFKQAAAEIIQRLS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2157 240 Coils Coil 83 103 - -
Alju02g2157 240 CDD bHLH_AtbHLH_like 51 101 IPR045239 -
Alju02g2157 240 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 21 236 IPR044278 GO:0003700|GO:0006355|GO:0009960
Alju02g2157 240 MobiDBLite consensus disorder prediction 23 39 - -
Alju02g2157 240 MobiDBLite consensus disorder prediction 1 16 - -
Alju02g2157 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 93 IPR011598 GO:0046983
Alju02g2157 240 MobiDBLite consensus disorder prediction 40 56 - -
Alju02g2157 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 51 105 IPR036638 GO:0046983
Alju02g2157 240 Gene3D - 46 114 IPR036638 GO:0046983
Alju02g2157 240 SMART finulus 49 99 IPR011598 GO:0046983
Alju02g2157 240 MobiDBLite consensus disorder prediction 1 56 - -
Alju02g2157 240 Pfam Helix-loop-helix DNA-binding domain 51 93 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2157 Alju-ChrAlju02 21052057 21053075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2157 52 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 33.913 2.06e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g2157 HLH 7.8e-06 No_clan