Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2156 ATGAAAAGATTATGGGACTTAGGCCTAGATGCCAAGCCCAACCCATTTTGCATTAAAAAGCCTTTATTGTTTACCAAACAAACTAAATTTTCAGAACAACCTGTCGTGGCGGTCGACTTTCCGGCGCCAGACAATCTTCTCTGGCTTTTTGTTGTTCACTGTTCCAGGTTCGTCGTCGGCCGTCTGGTTCTCTGTTCCCAGGTCGTCATAGCTGTCGATCGTCTCATCCTCGCTATTCCAACAGAAATGGCTCAAATGGTTTGTGGTTCTTGTCGTCATCTTCTTTCATATCAAAGAGGTGCCAAACATGTCAAGTGTTCTTGCTGTGAGACAGTAAACCTTGTGTTAGAAGCTGATCAGGTTGGGCAAGTCAAGTGTGGGAGCTGTGCAGTTCTGCTAATGTACCCATATGGCGCTTCACAAGTTAAGTGTAGCTCCTGCCAGTTTGTGACAAAAATTGAGGAACACAACAAGCGGCCCCCATGGTCTGTACAGCAACAGCAAGGGAAACCTACTCCTCCCAAATCAATGTCTTAG 537 0.46 MKRLWDLGLDAKPNPFCIKKPLLFTKQTKFSEQPVVAVDFPAPDNLLWLFVVHCSRFVVGRLVLCSQVVIAVDRLILAIPTEMAQMVCGSCRHLLSYQRGAKHVKCSCCETVNLVLEADQVGQVKCGSCAVLLMYPYGASQVKCSSCQFVTKIEEHNKRPPWSVQQQQGKPTPPKSMS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2156 178 MobiDBLite consensus disorder prediction 158 178 - -
Alju02g2156 178 NCBIfam zinc finger domain, LSD1 subclass 123 152 IPR005735 -
Alju02g2156 178 NCBIfam zinc finger domain, LSD1 subclass 85 115 IPR005735 -
Alju02g2156 178 Pfam LSD1 zinc finger 126 150 IPR005735 -
Alju02g2156 178 Pfam LSD1 zinc finger 88 112 IPR005735 -
Alju02g2156 178 PANTHER PROTEIN LSD1 80 170 IPR040319 -
Alju02g2156 178 MobiDBLite consensus disorder prediction 160 178 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Alju02g2156 zf-LSD1 8.2e-10 No_clan