Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2155 ATGTCAGTGAATCTAGAACCGTTGGATTTAGGAGTTCCGATTCCATACCACTTCAGATGCCCCATTTCCCTCGAGCTCATGCGCGAACCCGTTACTATATCCACGGGTCAGACCTACGACCGAACCAGCATCCAGTCTTGGTTCGCCGCCGGTAACACCACCTGCCCCGTCACCAGAGCCCCTCTTTCCGACTTCACTCTCATCCCAAACCACACTCTCCGCCGCCTTATCCAAGACTGGTGCGTTTCCAATCGCGATTTCGGAGTCGAACAGATCCCAAGTCCAACCCGACCCGCCTACCCTTCTCTGGTTCGGACGTTATTGAATCAAGCTTCGTCGGAGACGTGCACTTCTCAGTCACGTATCTCTGCACTGCGACGCCTCCGACGACTCGCTAGTGACTCGGAAAAGAATCTTTCTCTCATTGGATCTTACAACGTGCGCCGGATTTTACTCCATATCCTGTTTGATACCAATTCGGATTGTCTTGAGTTGAAGCACGAGGCTCTCGCACTTTTGGTTTGTTTCTCACTTGCCGAATCTGAATGCGTCTCCATCGCGTCGGAACCGGAGATAATCAAGTATTTGTCGCGTTTGATGTTTCATTCCTCGATCGACGTCCGAGTTAACTCGGCCTCTTTGATTGAGTCAGTCGTGAGCGGGACTCGTTCGCCGGAGCTGCGTGCACAAATCAGCAATGTCGATGAAATCTACGGTGGAGTGCTTGATATCTTGAAGAGTCCAGTTTCGTACCCTCGCGCTCTCAAGATTGGGATCAAGGCCTTGTTTGCTTTGTGCCTGCCAAAACAAACACGGCACAAAGCGGTGGCTGCCGGTGCTCCGACTATCCTCATCGACCGGCTCGCTGATTTCGAGAAATGCGATGCTGAGAGAGCTCTGGTGACGATTGAGTTGCTCTGTCGAATTCCTGAGGGGTTGGCCGCGTTCGCAGGGCACGCGCTGATGGTGCCGCAGCTGGTGAAAACAATACTGAAGATATCGGACCGGGCGACTGAGCATGCCTCCGTAGCGCTATTGGCTGTTTGCTCAGAATCGGAGGAGTGCCGGAGGGAGGCGGTGGCAGCGCGTGTGTTGACGCCACTGCTCTTGGTGGTACAGAGTGGTTGTACAGAGAGGGCAAAGAGGAAGGCGCAGATGTTGCTGAAGCTTCTTCGGGATTCGTGGCCTCAAGATTGCGTCGGAAACTCTGACGATTTTGCATGCGGCGAACTTGTAGTACCGTTTTGA 1248 0.5337 MSVNLEPLDLGVPIPYHFRCPISLELMREPVTISTGQTYDRTSIQSWFAAGNTTCPVTRAPLSDFTLIPNHTLRRLIQDWCVSNRDFGVEQIPSPTRPAYPSLVRTLLNQASSETCTSQSRISALRRLRRLASDSEKNLSLIGSYNVRRILLHILFDTNSDCLELKHEALALLVCFSLAESECVSIASEPEIIKYLSRLMFHSSIDVRVNSASLIESVVSGTRSPELRAQISNVDEIYGGVLDILKSPVSYPRALKIGIKALFALCLPKQTRHKAVAAGAPTILIDRLADFEKCDAERALVTIELLCRIPEGLAAFAGHALMVPQLVKTILKISDRATEHASVALLAVCSESEECRREAVAARVLTPLLLVVQSGCTERAKRKAQMLLKLLRDSWPQDCVGNSDDFACGELVVPF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2155 415 Gene3D - 288 403 IPR011989 -
Alju02g2155 415 ProSiteProfiles U-box domain profile. 13 87 IPR003613 GO:0004842|GO:0016567
Alju02g2155 415 PANTHER WDSAM1 PROTEIN 14 400 IPR045185 GO:0061630
Alju02g2155 415 SUPERFAMILY ARM repeat 103 392 IPR016024 -
Alju02g2155 415 SMART Ubox_2 17 80 IPR003613 GO:0004842|GO:0016567
Alju02g2155 415 FunFam U-box domain-containing protein 31 13 87 - -
Alju02g2155 415 CDD RING-Ubox_PUB 15 67 IPR045210 -
Alju02g2155 415 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 87 IPR013083 -
Alju02g2155 415 Pfam U-box domain 14 85 IPR003613 GO:0004842|GO:0016567
Alju02g2155 415 SUPERFAMILY RING/U-box 12 85 - -
Alju02g2155 415 Gene3D - 96 287 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2155 Alju-ChrAlju02 21029136 21030383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2155 1 415 U-box Gene Family AT1G49780 64.692 0.0 512