Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2154 ATGCTCCGTGGGATTGCCTTTCCCTTGTTTGGGCTTTTGGCCATCTTGGCAGTGCAGCTTCCTGCAATAATGGCTGTCTTGTTGTCTCTTATTGCTGCTGCTTTTGCAGATTGCCCTTTGGATTTGAGTACTTCAAACTTTACATTGGCATCCACTGTCTGCTCAGAACAAAGCGACAGAAATAGCTGTTGTCGCTACATTAATGCTAATATTGCCGTTTCTGTTGCTCGATATGCAAATGAAACAGCCAACCTTGGAGTCCCTCCAGATGCTTCTGTCTTCTGCCTCCAGACCATTACCGAGACTTTGCAACTTTATGGAGTTTCACCAAATGCAGCTGTTTTCTGTGGTTTTGGGACAAAAGTCCCTGTTGATTATGAGTGTAAAGGTCGAACTACTGTCACACAGATGCTGCAATCTCCCAGATTTGGAGAGGTCACTGAGAACTGCAAACTGCCTCTTGTAAAGGAAAGTGACTGCAAGATATGTTTGAATGCTGCCATTGGTTACCTACATAATGTAATCGGTGTACAAGATAATATCACATTGAGTACATGCCGTGATGCCACTTTTACTGCATTGGCAAGCCAAGTTGATGATATGTCTACTATTGAAATTGCAAGCTGTTTCTTTGGGGTTCAAGGACTTCTGGGGCCTACTGGTATGAATGCTTCAGAGCCATCCACTTCACCAACTCCTGAGGCTTCTCCGAGTCCTCCGGCTGCTGATAGCCCAAATCCATTGCAGTTAGGTGTACCACTTAAAAGAAATCACCATGGATACCACTTGACAATAATTCCAGGTATTGGTATTGCTGTCACAGGCGTTGCGGTTATGATGTTCATAGTCTTGATAGTTTTAATTCGTCAAAAAAGCAGAGAGCTAGAGGTTCCTGGTCATTTAAGTAAAACCTCAAAATCCTTACCCCCCTGTGCAGCATGGAGATTTCAGGATGGTCCTTTGTCTACATTTCGAAAATTCAACTATAGCGAGATAAAGAAAGCTACAGATGATTTTAGCACTATAATTGGGCAAGGAGGATTTGGAACTGTGTTTAAAGCTCATTTTAGTGATGGTCTAGTGGCAGCAGTAAAGCGAATGGATAGAGCATCAGAGCAAAAAGGGGATGAGTTCTGTAGAGAAATAGAGCTTGTTGCTCGGCTTCATCACCGCCATCTAGTTGCATTAAGAGGATTTTGCATTAAAAAACATGAGAGGTTTCTGGTGTACGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATTCCCCAGGGAAAACACCTCTCAGTTGGCGAACAAGAATCCAAATTGCCATTGATGTGGCTAATGCACTGGATTACCTTCATTTCTATTGTGATCCACCTCTCTGCCACAGAGACATTAAGTCTAGCAACATCTTACTGGATGATAAATTTGTTGCAAAGCTAGCCGATTTTGGACTGGCACACGCTTCAAAAGATGGTTCCATATGCTTTGAACCAGTAAATACTGATATTCGGGGAACTCCAGGTTATATGGATCCAGAATATATTGTTACTCAAGAACTCACCAAGAAAAGCGATATTTACAGTTTTGGTGTGGTATTATTAGAGATTGTAACCGGAAGACGGGCTATTCAAGATAATAAGAATCTGGTAGAATGGGCACAACCATTCATGGAATCTGAATCTAGATTGATGGAGTTAGTGGATCCCAATGTGAGGGAATCTTTTGATTTGGATCAGCTCCAAACAGTTGTCTCTATAGTAGGATGGTGCACTCAGAGAGAAGGCAGGGCAAGGCCTTCAATAAAACAGGTCCTTAGACTTCTGTATGAGACTTCAGAACCAATGCACAGTGGATTTTTACAAGCTGTTGAAGATGAAGAATATTTAGTAAATCAGCAATCTGGCAGAAGAAGCAAGGGAAAATTACACAGAAATGAACCAAATTATCACAGTGGGGATGGAAGATATCTAGCTTCTTCTTCAAGTACATCCAGGTCATATTGCAGTAGAAGTTTCTTACTTGAGACAGGATCTCCACAGTCCCCTCAAAATATTTTTTCAGTTTAA 2058 0.4169 MLRGIAFPLFGLLAILAVQLPAIMAVLLSLIAAAFADCPLDLSTSNFTLASTVCSEQSDRNSCCRYINANIAVSVARYANETANLGVPPDASVFCLQTITETLQLYGVSPNAAVFCGFGTKVPVDYECKGRTTVTQMLQSPRFGEVTENCKLPLVKESDCKICLNAAIGYLHNVIGVQDNITLSTCRDATFTALASQVDDMSTIEIASCFFGVQGLLGPTGMNASEPSTSPTPEASPSPPAADSPNPLQLGVPLKRNHHGYHLTIIPGIGIAVTGVAVMMFIVLIVLIRQKSRELEVPGHLSKTSKSLPPCAAWRFQDGPLSTFRKFNYSEIKKATDDFSTIIGQGGFGTVFKAHFSDGLVAAVKRMDRASEQKGDEFCREIELVARLHHRHLVALRGFCIKKHERFLVYEYMENGSLKDHLHSPGKTPLSWRTRIQIAIDVANALDYLHFYCDPPLCHRDIKSSNILLDDKFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYIVTQELTKKSDIYSFGVVLLEIVTGRRAIQDNKNLVEWAQPFMESESRLMELVDPNVRESFDLDQLQTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSGFLQAVEDEEYLVNQQSGRRSKGKLHRNEPNYHSGDGRYLASSSSTSRSYCSRSFLLETGSPQSPQNIFSV 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2154 685 CDD STKc_IRAK 343 605 - -
Alju02g2154 685 Gene3D Transferase(Phosphotransferase) domain 1 413 631 - -
Alju02g2154 685 MobiDBLite consensus disorder prediction 232 246 - -
Alju02g2154 685 Gene3D Phosphorylase Kinase; domain 1 315 412 - -
Alju02g2154 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Alju02g2154 685 MobiDBLite consensus disorder prediction 221 249 - -
Alju02g2154 685 MobiDBLite consensus disorder prediction 630 656 - -
Alju02g2154 685 SMART serkin_6 337 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2154 685 Pfam Protein kinase domain 341 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2154 685 FunFam Putative receptor-like protein kinase 413 613 - -
Alju02g2154 685 ProSiteProfiles Protein kinase domain profile. 337 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2154 685 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Alju02g2154 685 FunFam Putative receptor-like protein kinase 305 412 - -
Alju02g2154 685 Pfam SPARK 36 173 IPR043891 -
Alju02g2154 685 SUPERFAMILY Protein kinase-like (PK-like) 320 608 IPR011009 -
Alju02g2154 685 PANTHER OS01G0750732 PROTEIN 156 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2154 Alju-ChrAlju02 21009415 21013367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2154 36 684 Receptor kinase-like Gene Family AT3G19300 59.939 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Alju02g2154 Pkinase 5.7e-50 CL0016