Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2140 ATGTCTTCCTCCAAACGATCCATTCTCGCCAGAGTTCCGATGACATCCACCTCCACTCAGCCGCCGCCTAACTTCTTCTACAACGACCAAGAACACTCCGTCATCGTTGAGGCACTCACCAATGTCGTCGTCGGTTCCACCAGCACGATCTCGGCCACCACCTCCAGCGATCTTATCCAAGAGATTCGATTTCCTCCTACATTTGATTACTCCGATGCAGTATCGACCACAACCTCAGCCCCAATCGGACTCGTTCCGGCCATGAGCGTCGAGACTTGCGGAGAATGCAAAATCGAAGGGTGCTTAGGTTGCAAATTTTTCCGAGAGGAGAAAAAGAAAAGTGGAGGGAAAAAGAAGACGGCGACGGCGTCGTCGAAGAAGAAAAAGTACAGAGGAGTGCGTCAGAGGCCGTGGGGAAAATGGGCCGCTGAGATCCGAGACCCGAGAAGGGCGACCCGGGTTTGGTTGGGTACGTTCAATACCGCAGAGGAAGCAGCACGCGCTTACGATAATGCGGCGATTGAATTTCGCGGGCCGCGAGCGAAACTCAATTTCACGTTTCCTGATAATTCGCTAAGTGATTCGCTTTCCCAAACAGAGCATTTGGAAGTAGAACGCTCAGAGTCAGCATTGGAGCAGGCAGAGGAGGGAAATAGAAACTCAAATCCTGATAATTACTATGACGATGTTTGGACGATGGGAATTGGGAATAGTAAGGAAAATGAATTCTTTGCTGAACTTGGAGACCCAGAATTTCAGCAATGGATGACGATGATGATGGATTTTGGAGGAGATTCTTCGGACTCTGCTACCACCAATAGCCAGAGTCCTCATAGTTGGTGA 843 0.4994 MSSSKRSILARVPMTSTSTQPPPNFFYNDQEHSVIVEALTNVVVGSTSTISATTSSDLIQEIRFPPTFDYSDAVSTTTSAPIGLVPAMSVETCGECKIEGCLGCKFFREEKKKSGGKKKTATASSKKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDNAAIEFRGPRAKLNFTFPDNSLSDSLSQTEHLEVERSESALEQAEEGNRNSNPDNYYDDVWTMGIGNSKENEFFAELGDPEFQQWMTMMMDFGGDSSDSATTNSQSPHSW 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2140 280 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Alju02g2140 280 PRINTS Ethylene responsive element binding protein signature 152 168 IPR001471 GO:0003700|GO:0006355
Alju02g2140 280 MobiDBLite consensus disorder prediction 206 227 - -
Alju02g2140 280 CDD AP2 128 185 IPR001471 GO:0003700|GO:0006355
Alju02g2140 280 Gene3D AP2/ERF domain 128 187 IPR036955 GO:0003700|GO:0006355
Alju02g2140 280 SUPERFAMILY DNA-binding domain 129 186 IPR016177 GO:0003677
Alju02g2140 280 MobiDBLite consensus disorder prediction 261 280 - -
Alju02g2140 280 Pfam AP2 domain 129 178 IPR001471 GO:0003700|GO:0006355
Alju02g2140 280 MobiDBLite consensus disorder prediction 264 280 - -
Alju02g2140 280 ProSiteProfiles AP2/ERF domain profile. 129 186 IPR001471 GO:0003700|GO:0006355
Alju02g2140 280 MobiDBLite consensus disorder prediction 1 23 - -
Alju02g2140 280 PANTHER DNA-BINDING DOMAIN 111 214 IPR044808 GO:0003700|GO:0009873
Alju02g2140 280 SMART rav1_2 129 192 IPR001471 GO:0003700|GO:0006355
Alju02g2140 280 FunFam Ethylene-responsive transcription factor 2 128 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2140 Alju-ChrAlju02 20852412 20853254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2140 29 195 AP2-EREBP Transcription Factor Family AT4G34410 47.692 1.64e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju02g2140 AP2 5.5e-16 CL0081