Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju02g2099 | ATGGACGAGGGAGCAAATCGCCGGCGGCGATCAAGCCTTCCGGAGGGGAAACCGGCGCACTTTTTCAAGATAATACTTCCTACTACGATTCTTGACAAAAAAATGAGATTTCCTAAGACGTTTGTGAATCATCACGGGGATGATTTCTCTCCTATTATTACTTTACACGATCCTAATGCTCGAGAATGGAAAATTGGTTTGGATAAGATTGAAGAAGATGATGACCTTTGTTTCTCAGAAGGTTGGGAAAACTTCATGGAATACTATTCCCTCACCGAAGTACACTTTCTGGTTTTCAGATATGAAGGAGATTCAAAATTCCAGGTTCTAATATTTGACATGACTGGATCAGAAATTCAATATCCTTCTCAGAATTCAAGCCCCGAGAGAAACCAAGTTGCCTCATCGGGATCACCAAAGAGAAACGGCCATGTTCATCATCAGAGTCAAAATCACAATGATAATAATGACGGTGGTGGTGGTAGTGAAGGTGGCGGCAGTGATCATCATCAGAGTCAAAATCATAATGACAGTGGTAGGAGAAACCAGGTTGCTTCATCAGGATCACCAAAGGGCAACAACCATGTTCATCATCAGAGTGAAAATCATGATGTTGAAAATGGCGGCGGCGGCGGCGATCATCAAAATCGGAATGATAACGGTGGTGGTGGTGACGACGATGAAGGTGGTCGGAGAAACCAGGTTGCCTCATCAGAATCATCAAAGAGCAATGGTCATGATCGTCATTGGAGTCAAGATTATAATGATAATGATGTTGGTGGTAGTGGTGAGGGCGGTGGTGGCAGCCATTGCCGTGGCCGGGGCGGCGACATCTATCACTTTACTGAAGAATATTTTCCTGATGACGAGGATGATTCTACTCATGATGCACATGAAGAAGATAATTTCTACTATAGCATTTCTTTATCTAAATCCGCCTCTACTTCTCCATCTAAATCCACTTCACCAGCAACAACAAAAAGACGAGGCTTCACCAAATTCATAGATCAACCATCAAGAAGAGAAAGAAGAAAACAGCATTCTCCTCCCCCTTCCTCAAAAAGAAAGAGGCATGAACATAGTAGTGACAGTGAAAGTGATGAACAAAGTGATGGAGGTTCAAATAGTAGCAGAAGAAGAAGAAGAAGATCGATAGAAGAAAGACGCAGAGGAAGAGAAAAGAAATCAAACCACCAAGTGGAATGGCTTCGCAAACAAACATTGATATCAAAATCATACAAAAAGAGACACATATCAGAAAGAGCAAGAGCCAAGGTTATTGGAGCTGCAGACAGCTACAAACCAGAGTTTCCTTCTTTCAGGGCAGTCTTGAGGCCTCACAACTTATACAACAGTATAGTGTATGTGCCAGCAAGTTTTGCAGTGAAGTATTTGGGAAAAGGGTCAGGGAAGATAAGATTGGAGAACGTGAAGGGAAAACAGTGGGAAGCTAGATGCTTGCGCAAGAATGGATCAGGCAATGGAATGAGCATAGGAGAAGGGTGGGGTAAGTTTAAGATGGACAATGAAGTTAAGGAAGGAGATGTGTGTGTGTTTGAACTTGTGAACAAAAGAGATATTTTGTTGAGAGTTCAGATATTTCGTGTCAGACAATATGCAGATCGCTGA | 1629 | 0.4242 | MDEGANRRRRSSLPEGKPAHFFKIILPTTILDKKMRFPKTFVNHHGDDFSPIITLHDPNAREWKIGLDKIEEDDDLCFSEGWENFMEYYSLTEVHFLVFRYEGDSKFQVLIFDMTGSEIQYPSQNSSPERNQVASSGSPKRNGHVHHQSQNHNDNNDGGGGSEGGGSDHHQSQNHNDSGRRNQVASSGSPKGNNHVHHQSENHDVENGGGGGDHQNRNDNGGGGDDDEGGRRNQVASSESSKSNGHDRHWSQDYNDNDVGGSGEGGGGSHCRGRGGDIYHFTEEYFPDDEDDSTHDAHEEDNFYYSISLSKSASTSPSKSTSPATTKRRGFTKFIDQPSRRERRKQHSPPPSSKRKRHEHSSDSESDEQSDGGSNSSRRRRRRSIEERRRGREKKSNHQVEWLRKQTLISKSYKKRHISERARAKVIGAADSYKPEFPSFRAVLRPHNLYNSIVYVPASFAVKYLGKGSGKIRLENVKGKQWEARCLRKNGSGNGMSIGEGWGKFKMDNEVKEGDVCVFELVNKRDILLRVQIFRVRQYADR | 542 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju02g2099 | 542 | Gene3D | - | 13 | 116 | IPR015300 | - | |
Alju02g2099 | 542 | SUPERFAMILY | DNA-binding pseudobarrel domain | 433 | 535 | IPR015300 | - | |
Alju02g2099 | 542 | ProSiteProfiles | B3 DNA-binding domain profile. | 20 | 115 | IPR003340 | GO:0003677 | |
Alju02g2099 | 542 | SMART | B3_2 | 440 | 537 | IPR003340 | GO:0003677 | |
Alju02g2099 | 542 | SMART | B3_2 | 21 | 115 | IPR003340 | GO:0003677 | |
Alju02g2099 | 542 | MobiDBLite | consensus disorder prediction | 310 | 328 | - | - | |
Alju02g2099 | 542 | MobiDBLite | consensus disorder prediction | 355 | 381 | - | - | |
Alju02g2099 | 542 | MobiDBLite | consensus disorder prediction | 152 | 195 | - | - | |
Alju02g2099 | 542 | MobiDBLite | consensus disorder prediction | 310 | 399 | - | - | |
Alju02g2099 | 542 | CDD | B3_DNA | 20 | 113 | IPR003340 | GO:0003677 | |
Alju02g2099 | 542 | SUPERFAMILY | DNA-binding pseudobarrel domain | 16 | 114 | IPR015300 | - | |
Alju02g2099 | 542 | Pfam | B3 DNA binding domain | 21 | 113 | IPR003340 | GO:0003677 | |
Alju02g2099 | 542 | Pfam | B3 DNA binding domain | 444 | 535 | IPR003340 | GO:0003677 | |
Alju02g2099 | 542 | MobiDBLite | consensus disorder prediction | 196 | 210 | - | - | |
Alju02g2099 | 542 | Gene3D | - | 418 | 540 | IPR015300 | - | |
Alju02g2099 | 542 | MobiDBLite | consensus disorder prediction | 120 | 275 | - | - | |
Alju02g2099 | 542 | ProSiteProfiles | B3 DNA-binding domain profile. | 439 | 537 | IPR003340 | GO:0003677 | |
Alju02g2099 | 542 | CDD | B3_DNA | 438 | 535 | IPR003340 | GO:0003677 | |
Alju02g2099 | 542 | MobiDBLite | consensus disorder prediction | 219 | 233 | - | - | |
Alju02g2099 | 542 | PANTHER | B3 DOMAIN-CONTAINING | 14 | 532 | - | - | |
Alju02g2099 | 542 | MobiDBLite | consensus disorder prediction | 120 | 144 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju02g2099 | Alju-ChrAlju02 | 20361643 | 20364172 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju02g2099 | 410 | 540 | REM Transcription Factor Family | AT1G49480 | 43.939 | 3.56e-30 | 116 |