Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2085 ATGGGTTCGGTTCCTCCAGAACTGAGCTTGGATTTGAGGCCCACTTTCGTTCCCAAGACGATCAGTGATTTTCTCTACGAGGTTTCCGCGATCGGAAACGCCGCCGACAAGTTGTCGAGGTTCGATGAGTTTCTCAAGAGACTGGAAGAGGAAATGAGGAAGATCGACGTTTTTAAGCGTGAGCTTCCTCTCTGCATGCTCCTCTTGAATGATGCAATCTTGACTCTGAGGGAGGAATCAGCAAAACTCAGGACACCAATTTCTCAGCCAGTGCTTGAAGAATTTATTCTCTTGACGAAAGAATGTGACCAGAAAAAGGATGATAAGAAAGAAAAGGAATGCAGAGATAAGAAGACTTGGATGAGTTCTGTTCAGCTCTGGAATACAGATAATCATCCCACTACTAACAATGCTTATGACCAAAGGCAACACTATGAATTAGAAACCAAGAAATGCCAAGACGAAGGACAATCTGTGCCTGAGGGCCCATTTCAATCTTGTAGAAAAATTGATAATGGGTGCAGGGCGTTTTTGCCTTTTTCATCCTATCCTAGCATCCCTGTGACACCAGTGACAACTAAGGAAGAAAAGGAAGACTCCATTAATGGTCTCTCTCTTATGACTCCTGGTACTAAAAATTTGAGGGAAGGTTCTGGTTCAAGCGGATCAAGAAGTGGCTCTAGCAGAGCAGTTTCTTCCTCGACTCCTAGTTTACAGTCAATTATACCCACAGGTCATCAACAGCCACAGAAGCAAGTTGCCAGGAAACACAGGAGGTGCTGGTCACCAGAGCTGCATCGACGATTTATCAATGCTTTACAGCAACTCGGAGGTTCTCTAGCGGCAACGCCAAAACAAATAAGAGAACTCATGCAGGTTGATGGCCTGACCAACGATGAAGTGAAAAGTCATTTACAAAAATATCGACTTCACACTCGAAGAACACCGGCTACCACAGCTGCAACTGCTAATCAATCTGTAGTTCTTGGAGGTTTGTGGATGTCCCGAGATCAGCACAATGAATCCTCCAAGGCTAGCAGTTCTGGTTCTGGTTCTCCTCAAGGTCCCCTCCAGTTAGCAGCATCCGGTGGACGGATGTCTCGAACCGAAGGTGACAGCATGGAAGATGATGAAGATGAAAAATCAGAGTGCTTTAGCTGGAAAGGTCACACTCACAGACCTGGAAAAGATACCCAGAATATTTTAGGCACTTCTTGGTTAGATTTACAAATTTTGCTTTTCAATCTTTTAGATTTGGTGACTGTTGTGGACGATTTGCTCTGGGATTCTTCTCCTTGA 1299 0.4465 MGSVPPELSLDLRPTFVPKTISDFLYEVSAIGNAADKLSRFDEFLKRLEEEMRKIDVFKRELPLCMLLLNDAILTLREESAKLRTPISQPVLEEFILLTKECDQKKDDKKEKECRDKKTWMSSVQLWNTDNHPTTNNAYDQRQHYELETKKCQDEGQSVPEGPFQSCRKIDNGCRAFLPFSSYPSIPVTPVTTKEEKEDSINGLSLMTPGTKNLREGSGSSGSRSGSSRAVSSSTPSLQSIIPTGHQQPQKQVARKHRRCWSPELHRRFINALQQLGGSLAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRTPATTAATANQSVVLGGLWMSRDQHNESSKASSSGSGSPQGPLQLAASGGRMSRTEGDSMEDDEDEKSECFSWKGHTHRPGKDTQNILGTSWLDLQILLFNLLDLVTVVDDLLWDSSP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2085 432 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 388 IPR044787 GO:0003700|GO:0006355
Alju02g2085 432 Coils Coil 41 61 - -
Alju02g2085 432 NCBIfam myb-like DNA-binding domain, SHAQKYF class 256 311 IPR006447 GO:0003677
Alju02g2085 432 MobiDBLite consensus disorder prediction 190 252 - -
Alju02g2085 432 MobiDBLite consensus disorder prediction 381 395 - -
Alju02g2085 432 MobiDBLite consensus disorder prediction 204 250 - -
Alju02g2085 432 MobiDBLite consensus disorder prediction 338 399 - -
Alju02g2085 432 MobiDBLite consensus disorder prediction 338 357 - -
Alju02g2085 432 FunFam Myb family transcription factor 255 313 - -
Alju02g2085 432 Pfam Myb-like DNA-binding domain 258 309 IPR001005 -
Alju02g2085 432 Gene3D - 255 313 - -
Alju02g2085 432 SUPERFAMILY Homeodomain-like 254 314 IPR009057 -
Alju02g2085 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 255 313 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2085 Alju-ChrAlju02 20190069 20192498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2085 7 334 G2-like Transcription Factor Family AT2G03500 39.244 1.50e-55 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju02g2085 Myb_DNA-binding 6.7e-07 CL0123