Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2078 ATGGGAGTTTGTGTCTCTAAGCCATCGAAACCGAATCCATATGCGGGTAAGCAAACAGAAGAAGAAGACCATGATAATCGATATGAAGATTCTTCTTCTCAAATCCCGAAATCCCCGCTTTCTCCCATCACCAACAACTACCACCGGGAAGATGACGTCACTACCGGGAAGAAGTCTCCGTTTTTCCCCTTCTACAGCCCTAGTCCAGCTCATTTTCTAAAGAATTCTCCGGCGTCGACGCCGGGAGGGAGCAAGAGCGCGAGTTCGACGCCAAGGAGGTTCTTCCTGCGGCCTCTTCCTCCGCCGTCGCCGGCCAAGCACATAAAGGCTGTGCTGGCGAGGAGGCAGGGGAGGAAGGCTGCGAAAGCTATCCCCGAAGAAGGGGAGGAAGAAGAATCCAGAGATTTGGACAAGAGGTTTGGGTTTTCGAAGGAATTCACGAGTAGATTGGAGGTTGGGGAAGAAATAGGAAGAGGACATTTTGGTTTTACATGCTCTGCTAGGTTCAAGAAAGGTGAACGTAAGGGTCAGCAAGTGGCCGTGAAGGTCATTCCCAAAGCTAAGATGACAACAGCAATTGCAGTTGAAGATGTTAGAAGGGAGGTGAAAATATTACGAGCCTTGACTGGACACAACAATCTGGTGCAATTCTATGATGCTCTTGAAGATCAAGATAATGTCTACATTGTAATGGAGTTATGTGAAGGAGGCGAGCTGTTAGATAGAATACTTTCAAGAGGAGGGAAATACTCAGAAGATGACGCAAAAGCTGTCATTACACAAATACTGAATGTTGTTGCGTTCTGTCATCTTCAGGGTGTGGTGCACAGGGATCTTAAGCCAGAGAATTTTCTGTATGTTTCAAAGGATGAGAACGCTGAATTAAAAGCTATTGACTTTGGGTTATCAGACTTTGTCAAACCAGATGAAAGGCTCAATGATATCGTGGGCAGTGCATACTATGTGGCCCCTGAAGTTCTACATAGATCTTACAGTACAGAAGCTGATGTGTGGAGTATAGGCGTGATAGCATATATTCTCTTATGTGGTAGTCGTCCTTTTTGGGCCCGAACAGAGTCTGGTATATTCAGGGCTGTTCTAAAAGCTGATCCAATCTTTGATGAACCTCCTTGGCCATCCTTATCTTCAGAAGCAAAAGATTTTGTTAAGCGCCTATTGAATAAGGACCCAAGGAAGCGAATATCAGCTGCTCAGGCTCTAAGTCATCCTTGGATTAGGAATTTCAACAATGTAAAAGTTCCTCTTGATATTTTAATATTTAAGCTCATGAAGGCTTATATGCGATCATCATCCTTGCGCAAGGCCTCTTTAAGGGCACTGTCAAAGACGTTGACTGCTGATGAGCTCTATTATCTGAGGGAGCAATTTGCTCTGCTGGAGCCAAGCAAAAATGGTAGCTTGACATTAGAAAACATCAAGATGGCGCTGATGAAACATGCAACAGATGCCATGAAAGAGTCCCACATTTCTGATTTTATTGCCTCGCTAAATCCATTACAATATAGAAGAATGGGATTTGAAGAATTTTGTGCGGCTGCATTAAGTGTGCATCAGCTTGAAGCTCTTGATCGCTGGGAGCAACATGCACGCTGTGCATATGAAATCTTTGAGAAAGATGGAAACAGAGCTATTGTCATTGAAGAACTTGCCTCAGAACTTGGACTTGGCCCTTCTATCCCCCTTCATGTTGTACTTGTGGATTGGATAAGGCACACTGATGGGAAGCTAAGCTTTCTTGGGTTTGTCAAATTGTTACACGGTGTATCTGGCCGAACTCTTTCAAAGGTGCAATAG 1815 0.4452 MGVCVSKPSKPNPYAGKQTEEEDHDNRYEDSSSQIPKSPLSPITNNYHREDDVTTGKKSPFFPFYSPSPAHFLKNSPASTPGGSKSASSTPRRFFLRPLPPPSPAKHIKAVLARRQGRKAAKAIPEEGEEEESRDLDKRFGFSKEFTSRLEVGEEIGRGHFGFTCSARFKKGERKGQQVAVKVIPKAKMTTAIAVEDVRREVKILRALTGHNNLVQFYDALEDQDNVYIVMELCEGGELLDRILSRGGKYSEDDAKAVITQILNVVAFCHLQGVVHRDLKPENFLYVSKDENAELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPIFDEPPWPSLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIRNFNNVKVPLDILIFKLMKAYMRSSSLRKASLRALSKTLTADELYYLREQFALLEPSKNGSLTLENIKMALMKHATDAMKESHISDFIASLNPLQYRRMGFEEFCAAALSVHQLEALDRWEQHARCAYEIFEKDGNRAIVIEELASELGLGPSIPLHVVLVDWIRHTDGKLSFLGFVKLLHGVSGRTLSKVQ 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2078 604 PANTHER SERINE/THREONINE-PROTEIN KINASE 134 572 - -
Alju02g2078 604 FunFam Calcium-dependent protein kinase SK5 322 416 - -
Alju02g2078 604 Pfam Protein kinase domain 151 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2078 604 MobiDBLite consensus disorder prediction 16 31 - -
Alju02g2078 604 MobiDBLite consensus disorder prediction 72 101 - -
Alju02g2078 604 FunFam CDPK-related kinase 1 143 238 - -
Alju02g2078 604 SMART serkin_6 150 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2078 604 MobiDBLite consensus disorder prediction 72 91 - -
Alju02g2078 604 ProSitePatterns Protein kinases ATP-binding region signature. 156 182 IPR017441 GO:0005524
Alju02g2078 604 FunFam CDPK-related kinase 3 142 314 - -
Alju02g2078 604 Gene3D Phosphorylase Kinase; domain 1 152 239 - -
Alju02g2078 604 SUPERFAMILY EF-hand 441 594 IPR011992 -
Alju02g2078 604 ProSiteProfiles Protein kinase domain profile. 150 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2078 604 CDD STKc_CAMK 151 411 - -
Alju02g2078 604 Gene3D Transferase(Phosphotransferase) domain 1 240 434 - -
Alju02g2078 604 FunFam CDPK-related kinase 1 448 521 - -
Alju02g2078 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Alju02g2078 604 SUPERFAMILY Protein kinase-like (PK-like) 146 452 IPR011009 -
Alju02g2078 604 MobiDBLite consensus disorder prediction 32 49 - -
Alju02g2078 604 Gene3D - 435 594 - -
Alju02g2078 604 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2078 Alju-ChrAlju02 20109689 20114223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2078 1 600 EF-hand Containing Proteins AT3G50530 69.646 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju02g2078 Pkinase 6.5e-72 CL0016