Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2063 ATGGTGGTTTCTAAGTTAACATACGAAGAATGCAGGCGACAACGGCTAGAAGAAAACAAGAAGAGAATGGAAGAGCTCAACCTCAACAAGCTTGCTTCTGCTTTGAAACCTACACCTTCACCTAATAAATCTTCCCCTGCGAAGGCTAGGGTGCCACGTCAGCCTGTGAGTCCTTCTTCTGCTCCAGTAAGAAGATCTAGTCGCGTAGCCAGCTTCCCTTCTCCAAACTATAAGGAAGTTCCCATTGAACCTTTGGTGAGACCAAGAAGGTCCTATCAGAAAAGGGACTTGCTAAATCGAGTTTATGCTTCAGATGAAGTTAGGCAATATGCAATTGATAGAGCTGAAGAACTTCTCTCTGGTTTAGATTCTAAATACCCAAGTTTCATCAAACCTATGCTCCAATCACATGTCACAGGAGGATTTTGGCTAGGTCTTCCAGTTCAGGTCTGTAAAACCCATCTTCCCGACCATGATGAAACAATAACTCTAATAGATGAGGATGGGAACGAGTCTTCCACCAAATACCTTGCTGATAAAACTGGTCTTAGTGGTGGTTGGAGGGGTTTCTCAATTGATCATGAACTAGTTGATGGGGATGCATTAGTGTTTCAACTGATAAAACCCACCGAATTTAAGGTGTTCATAATTAGAGCAAATAAATCAGAAAACAAAGAGGAAGGAGATGAAGATTTGGATGCTTCACACTTGAACAGGAGCTCCAAAAGAGTCAGAGCAAGTAACTCCCTTTTACAATGTCTCTCTTATAACGCATGTTCTGTTATTCTCTATGAGCATAAAGCTAGGTTTTGA 813 0.417 MVVSKLTYEECRRQRLEENKKRMEELNLNKLASALKPTPSPNKSSPAKARVPRQPVSPSSAPVRRSSRVASFPSPNYKEVPIEPLVRPRRSYQKRDLLNRVYASDEVRQYAIDRAEELLSGLDSKYPSFIKPMLQSHVTGGFWLGLPVQVCKTHLPDHDETITLIDEDGNESSTKYLADKTGLSGGWRGFSIDHELVDGDALVFQLIKPTEFKVFIIRANKSENKEEGDEDLDASHLNRSSKRVRASNSLLQCLSYNACSVILYEHKARF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2063 270 Coils Coil 6 33 - -
Alju02g2063 270 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 34 226 IPR044837 -
Alju02g2063 270 MobiDBLite consensus disorder prediction 59 73 - -
Alju02g2063 270 Pfam B3 DNA binding domain 129 218 IPR003340 GO:0003677
Alju02g2063 270 MobiDBLite consensus disorder prediction 29 75 - -
Alju02g2063 270 MobiDBLite consensus disorder prediction 33 47 - -
Alju02g2063 270 CDD B3_DNA 127 218 IPR003340 GO:0003677
Alju02g2063 270 ProSiteProfiles B3 DNA-binding domain profile. 129 220 IPR003340 GO:0003677
Alju02g2063 270 SUPERFAMILY DNA-binding pseudobarrel domain 122 220 IPR015300 -
Alju02g2063 270 Gene3D - 105 222 IPR015300 -
Alju02g2063 270 SMART B3_2 129 220 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2063 Alju-ChrAlju02 19957377 19965403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2063 1 241 B3 DNA Binding Superfamily AT3G19184 60.000 4.56e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju02g2063 B3 1.7e-13 CL0405