Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju02g2029 | ATGTCAACCATCTCCGACCATTCCTCTACCACCAACTTTCCTCTGCATGAACTCACTAAGACCACACCTTTTCTGGGTTTACAACTCTACATCGTTATTTGCGTTTTCCTCTTCATCTTCCTCTTTCTGGTTCTTCTGATCTTCCTCTGCATTCGCCGGAATCGAACCTCCGACAAGCCCTGTACCATAGCCAGCCAAAGCTCCGGCGTGATTCCGTTGGTCTCCAAGGAGATCGTGGAGGTCGAAGCCTTGGATCTTCTTGGTGTTCAAGAGACAAAGCTTAAGGTTGAAGGTCGTGATCGGAGGAGGAAGCAGGTGGAAGACGAGGACGGGATTGATGTTGGTGGATTTCGGAGAGGAAAACAGAGGAACGATGAGATTGATGCCGCCGTCGACGGTTTGACGATTGGGTGGGGCCGTTGGTACAGCTTGGAGGAGCTTAAGCTTGCGACATGTGGATTCGCCGACGAGAATGTCATCGGAGAAGGAGGTTATGGAATTGTTTACAGAGGAGTTCTTCAAGATGGCTCTGTAGTTGCTGTCAAGAAACTTCTTAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAGGTTGAAGCTATTGGAAAAGTAAAGCATAAAAATTTGGTGGGTTTGATAGGATATTGTGCAGAAGGTGCTCAAAGGATTCTTGTTTATGAATATGTTGAGAATGGGAACTTGGAGCAGTGGTTGCATGGTGAGGTAGGGCCTGCTAGCCCCTTAACATGGGACATACGTATGAGGATCGCGATAGGGACGGCTAAAGGGCTAGCCTATTTGCATGAAGGTTTGGAACCCAAAGTTGTTCACCGAGATGTGAAATCTAGTAACATTCTTCTCGACAAAAGATGGAATGCCAAGGTATCAGACTTTGGACTGGCGAAACTCTTAGGATCCGAGAAAAGCTACGTGTCTACACGCGTAATGGGGACATTCGGATATGTTTCACCTGAGTATGCGAGCACGGGCATGCTTAATGAAGGTAATGATGTGTATAGTTTTGGAGTTCTGCTGATGGAGATCATCACCGGAAGAAGTCCCATAGATTATTCTAGATCGCCGGCAGAGATGAACTTGGTTGACTGGTTCAAGGGAATGGTGGCGAGTCGCCGTGGTGATGAGCTAGTAGATCCTTCAATTGAGATTAAGCCGTCTCCGAGATCACTGAAGCGAGCTTTGCTGGTTTGTCTGCGCTGCATAGATATGGATGTCTGTAAGAGGCCAAAGATGAGTCAAATAGTTCATATGCTTGAAGCAGATGATTTCCCCTTTCGTTCTGAACTTCGGACAGCTAAAGAGAAAGATCCTGTGCCTTCTCATGCAGCTGTTTCAAGCAAAATTTCATATCCATCAAGGCTTGTGGAATCAGTTGAAAGATCAAGATGGCGATGA | 1416 | 0.4661 | MSTISDHSSTTNFPLHELTKTTPFLGLQLYIVICVFLFIFLFLVLLIFLCIRRNRTSDKPCTIASQSSGVIPLVSKEIVEVEALDLLGVQETKLKVEGRDRRRKQVEDEDGIDVGGFRRGKQRNDEIDAAVDGLTIGWGRWYSLEELKLATCGFADENVIGEGGYGIVYRGVLQDGSVVAVKKLLNNKGQAEKEFKVEVEAIGKVKHKNLVGLIGYCAEGAQRILVYEYVENGNLEQWLHGEVGPASPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGSEKSYVSTRVMGTFGYVSPEYASTGMLNEGNDVYSFGVLLMEIITGRSPIDYSRSPAEMNLVDWFKGMVASRRGDELVDPSIEIKPSPRSLKRALLVCLRCIDMDVCKRPKMSQIVHMLEADDFPFRSELRTAKEKDPVPSHAAVSSKISYPSRLVESVERSRWR | 471 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju02g2029 | 471 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 276 | 288 | IPR008271 | GO:0004672|GO:0006468 | |
| Alju02g2029 | 471 | SUPERFAMILY | Protein kinase-like (PK-like) | 134 | 426 | IPR011009 | - | |
| Alju02g2029 | 471 | ProSitePatterns | Protein kinases ATP-binding region signature. | 160 | 183 | IPR017441 | GO:0005524 | |
| Alju02g2029 | 471 | PANTHER | OS01G0323000 PROTEIN | 16 | 444 | - | - | |
| Alju02g2029 | 471 | ProSiteProfiles | Protein kinase domain profile. | 154 | 418 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Alju02g2029 | 471 | Gene3D | Phosphorylase Kinase; domain 1 | 128 | 229 | - | - | |
| Alju02g2029 | 471 | Gene3D | Transferase(Phosphotransferase) domain 1 | 230 | 438 | - | - | |
| Alju02g2029 | 471 | FunFam | Probable serine/threonine-protein kinase At1g01540 | 134 | 229 | - | - | |
| Alju02g2029 | 471 | FunFam | Putative receptor-like serine/threonine-protein kinase | 230 | 440 | - | - | |
| Alju02g2029 | 471 | Pfam | Protein kinase domain | 155 | 423 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Alju02g2029 | 471 | SMART | serkin_6 | 154 | 432 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Alju02g2029 | 471 | CDD | STKc_IRAK | 160 | 426 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju02g2029 | Alju-ChrAlju02 | 19612871 | 19615682 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju02g2029 | 119 | 426 | Trihelix Transcription Factor Family | AT5G38560 | 46.203 | 1.37e-90 | 288 |
Transcription factors information