Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2025 ATGGTGGATCGGCGAAGAAGCCTAGTGTCTCTCGGGTTTTTCTTCTTCTCGTTGCTGTTTCAGTTCACATTTGAACAGATTACGCCTCTGAGTTCAAACATTGAGCTAGCTGCTCTCTTTGATCTTAGATCGTCTCTGGGGCTGAGAAGCAGGGAATGGCCAAGAAAAGTTGACCCTTGCTCTTTCTGGAAGGGGGTCACATGTGAGAATGGTCGAGTCATTGGGATCAATATTTCTGGGTTTAGAAGAACCCGTCTTGGGAGGCTAAACCCACAATTTTCAGTCCGAGGCGTAGCCAATTTAACTCTCTTGCAATCTTTCAATGCCTCCAATTTTCTGCTTCCTGGTTCTATTCCCGACTGGTTTGGCCTGCAGCTCTCATCTCTGAAGGTGCTTGATCTTCGGTCTTGCTTTGTGAATGGTGCTATTCCTTCCAGTATTGGGAATTTAACTAACCTCACTAGTCTGTATTTATCTGATAATAATCTTACTGGGATAATCCCTGATAGTCTGGGTCAACTGCTAAGCCTTTCAGTTGTTAACTTTTCGAGAAATCATCTTTCTGGAACCATTCCAACATCGTTTGTCTCTCTTGGGAATCTTTCCTCTCTTGACATTTCCGACAATTTTTTGTCTGGCTTGATTCCTCCTGGCATTGGGGCCCTCACAGGGTTACAATTCTTGAATCTTTCTGGTAACAGTTTTATGGCTTCTATACCATCTCAGCTGGGAAATTTAAGCAGCTTGATTGACCTTGATCTTAGTTTTAATTCTTTGACTGGTGGGGTGCCTCCGGAATTAAGAGGGCTGAGGAGCTTGCAGAGAATGAGACTAAATAACAACATGCTTGATAGACTTTTGTCGGAGAACTTGTTTCCTACTTTGTCACAATTGCAGGTTGTTGTGCTGAGACAAAACAATTTCACCGATGATCTGCCTGATGCACTTTGGTCTCTGCCGAGATTGAGCTATCTCGACCTTTCTGATAACAATTTCACTGGTATGCTTCCAAATTCTAGTTCCAATCAGAATGCGACTGCTGCTATGCTTAATATTTCTAATAATATGTTTTATGGAAGCCTAAGTCCTATTATCAGAAGGTTCAGTGTCATTGATCTGTCAAGCAATTATTTTGAGGGCAAGATTCTAAATTCCATGCTTAATATATCTCTAAATACAAACTGCCTCCAAAATGTTTCGAATCAGAGGACAGCTGGGGAATGTGCATCGTTTTATGCTGAGAGGGGCCTCACTTTTGATAATTTTGGACGCCCGAATTCAACGGGACCTCCTGTGCCTGAAAGCTCTCGGAAGAGCAATAGAGATAAGATTATATTGGCTGCAGTCTTGGGTGGATTTGGTTTGCTTGTTATTTTGTTGTTGCTATTGGTCTTGTTCCTTCTTTGTTCTCGTAAGAGGCGTAATTCGAGTCAAAGAGGAAATGGTGTGGGCCCTGCTCCTGCTGGGAGCAGTCCTCCACCCCCTGGCATGTCAATCAATTTCATAAATGTGGGAGATTCATTTACAATACAGCAGCTGCTTCAGGCTACTGGTGATTTCAGTGATGCAAATCTTATCAAACACAGCCACTCTGGGGATCTCTTCAACGGTGTTTTGGAAAGTGGCATACCTGTAGTCATTAAAAGGATTGATGTGCGTACAACTAAGAAAGATTCTTCCCTAGTGGAATTGGACTTTTTCAGTAAGATTTCTCATACTAGATTTGTTCCTCTGCTGGGCCATTGCCTGGATAATGAGAATGAGAAGTTCCTTGTTTATAAACATATGCCAAATGGGGACTTGGCAAATAGTCTTTATTACAAAAAATCTACGTCTGAAGATGGTACTTTGCAGTCATTGGACTGGATAACAAGGTTGAAAATTGCTATTGGAGCGGCGGAGGCCCTAACTTATCTGCATCATGAGTGTAATCCACCCTTTGTTCATAGAGATATTCAAGCAAGCAGTATACTTTTAGATGATAAATATGAAGTTCGGTTAGGTAGTCTAAGTGAAGTCTGCACCCAAGAAGGGGATAGTCATCAGAGCAAAATTACTAGGCTGCTAAGGCTGCCCCAGTCCTCTGATCCAGGCACATCTGGTTCATCTACATCAAACTGTGCCCATGATGTTTATTGCTTCGGTAAAATATTGCTTGAATTGGTGACTGGGAAGATTGGAATCAGCGCGTCCAGTGATGCTGAATTAAAGGAATGGTTGGATCAGATGTTACCATTCATTAGTATTTATGAGAAGGAGCTTGTAGCAAAAATTGTGGATCCATCTCTGGTTGTAGATGAGGATTTCTTAGAGGAAGTGTGGGCTATTGCCATTGTTGCAAGATCTTGCCTAAATCCTAAACCTTCAAGACGACCGCCCATGCGATACGTTCTCAAGGCACTAGAAAACCCCTTTAAAGTTGTGAGGGAAGAAGGTGCCGGTTCTTCTCGGCTTAGAGCAACCTCTTCTAGAGGCTTTTGGAATGCTGCTTTGTTTGGTAGTTGGCGTCAGAGTTCTGACGTAACGGCAATCCCAGCAGCTTCTGGTACCAAATTAGAAGGAGGGAGTAGTTTAAAGCATTCTGGAACAACAGGCTCACAGGGTAGTGGCAACAATGGCGGTGGTTCATCATCCCGGAGGCGACATTCAAACGAAATATTCCCGGAGCCATCTAACATACAGGACATTGAGAGGCCAGAACAGCAGGAATAG 2712 0.4307 MVDRRRSLVSLGFFFFSLLFQFTFEQITPLSSNIELAALFDLRSSLGLRSREWPRKVDPCSFWKGVTCENGRVIGINISGFRRTRLGRLNPQFSVRGVANLTLLQSFNASNFLLPGSIPDWFGLQLSSLKVLDLRSCFVNGAIPSSIGNLTNLTSLYLSDNNLTGIIPDSLGQLLSLSVVNFSRNHLSGTIPTSFVSLGNLSSLDISDNFLSGLIPPGIGALTGLQFLNLSGNSFMASIPSQLGNLSSLIDLDLSFNSLTGGVPPELRGLRSLQRMRLNNNMLDRLLSENLFPTLSQLQVVVLRQNNFTDDLPDALWSLPRLSYLDLSDNNFTGMLPNSSSNQNATAAMLNISNNMFYGSLSPIIRRFSVIDLSSNYFEGKILNSMLNISLNTNCLQNVSNQRTAGECASFYAERGLTFDNFGRPNSTGPPVPESSRKSNRDKIILAAVLGGFGLLVILLLLLVLFLLCSRKRRNSSQRGNGVGPAPAGSSPPPPGMSINFINVGDSFTIQQLLQATGDFSDANLIKHSHSGDLFNGVLESGIPVVIKRIDVRTTKKDSSLVELDFFSKISHTRFVPLLGHCLDNENEKFLVYKHMPNGDLANSLYYKKSTSEDGTLQSLDWITRLKIAIGAAEALTYLHHECNPPFVHRDIQASSILLDDKYEVRLGSLSEVCTQEGDSHQSKITRLLRLPQSSDPGTSGSSTSNCAHDVYCFGKILLELVTGKIGISASSDAELKEWLDQMLPFISIYEKELVAKIVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPFKVVREEGAGSSRLRATSSRGFWNAALFGSWRQSSDVTAIPAASGTKLEGGSSLKHSGTTGSQGSGNNGGGSSSRRRHSNEIFPEPSNIQDIERPEQQE 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2025 903 Gene3D Ribonuclease Inhibitor 290 399 IPR032675 -
Alju02g2025 903 Gene3D Ribonuclease Inhibitor 192 289 IPR032675 -
Alju02g2025 903 Pfam Protein tyrosine and serine/threonine kinase 532 746 IPR001245 GO:0004672|GO:0006468
Alju02g2025 903 SUPERFAMILY RNI-like 98 399 - -
Alju02g2025 903 PANTHER RECEPTOR-LIKE PROTEIN 55 289 803 - -
Alju02g2025 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 32 191 - -
Alju02g2025 903 Pfam Leucine Rich Repeat 200 221 IPR001611 GO:0005515
Alju02g2025 903 ProSiteProfiles Protein kinase domain profile. 520 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g2025 903 FunFam Predicted protein 490 595 - -
Alju02g2025 903 FunFam Leucine-rich repeat receptor protein kinase EMS1 192 290 - -
Alju02g2025 903 Gene3D Ribonuclease Inhibitor 32 191 IPR032675 -
Alju02g2025 903 MobiDBLite consensus disorder prediction 849 903 - -
Alju02g2025 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 294 424 - -
Alju02g2025 903 SMART LRR_typ_2 150 173 IPR003591 -
Alju02g2025 903 SMART LRR_typ_2 319 342 IPR003591 -
Alju02g2025 903 SMART LRR_typ_2 198 221 IPR003591 -
Alju02g2025 903 SMART LRR_typ_2 222 246 IPR003591 -
Alju02g2025 903 SMART LRR_typ_2 270 294 IPR003591 -
Alju02g2025 903 SMART LRR_typ_2 295 318 IPR003591 -
Alju02g2025 903 MobiDBLite consensus disorder prediction 475 496 - -
Alju02g2025 903 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Alju02g2025 903 Pfam Leucine rich repeat 288 332 IPR001611 GO:0005515
Alju02g2025 903 Gene3D Transferase(Phosphotransferase) domain 1 596 813 - -
Alju02g2025 903 MobiDBLite consensus disorder prediction 854 903 - -
Alju02g2025 903 Gene3D Phosphorylase Kinase; domain 1 498 595 - -
Alju02g2025 903 FunFam Putative LRR receptor-like serine/threonine-protein kinase 596 821 - -
Alju02g2025 903 ProSiteProfiles Leucine-rich repeat profile. 152 173 IPR001611 GO:0005515
Alju02g2025 903 SUPERFAMILY Protein kinase-like (PK-like) 495 801 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2025 Alju-ChrAlju02 19578777 19584141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2025 35 693 Miscellaneous Gene Families AT2G16250 57.143 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Alju02g2025 PK_Tyr_Ser-Thr 6.7e-18 CL0016