Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2024 ATGGCTTCTGCAGATGTTGAGTACCGTTGTTTTGTCGGTGGGTTAGCGTGGGATACCGACAACGATGCCCTCGGCCAGGCCTTTGCTCCTTTCGGCGATGTTATCGAATCGAAGATTATCAACGATCGTGAGACCGGAAGGTCCAGAGGGTTCGGATTCGTGACCTTCTCCTCAGAACAGTCCATGAGGCAGGCGATCGAAGGCATGAACGGTCAGAGCCTTGATGGCCGGAACATCACTGTGAACGAAGCTCAGTCTCGAGGAAGAGGCGGCAGCAGTGGTGGAGGTTACGGCGGTGGGGGTGGCTATAGCCGTGGTGGAGGTGGATACGGAGGCGGAGGACGCCGCGAGGGTGGATACAACAGGAGCGGTGGGGGATATGGCTCTGGCGGCGGTTATGGTGATCGTGGATCTCGCTACTCTAGGGGTGGTGAGTCCGATGGAAGCTGGAGGAATTGA 459 0.5752 MASADVEYRCFVGGLAWDTDNDALGQAFAPFGDVIESKIINDRETGRSRGFGFVTFSSEQSMRQAIEGMNGQSLDGRNITVNEAQSRGRGGSSGGGYGGGGGYSRGGGGYGGGGRREGGYNRSGGGYGSGGGYGDRGSRYSRGGESDGSWRN 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2024 152 FunFam Glycine-rich RNA-binding protein GRP1A 2 114 - -
Alju02g2024 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Alju02g2024 152 SUPERFAMILY RNA-binding domain, RBD 8 117 IPR035979 GO:0003676
Alju02g2024 152 SMART rrm1_1 9 82 IPR000504 GO:0003723
Alju02g2024 152 MobiDBLite consensus disorder prediction 69 89 - -
Alju02g2024 152 MobiDBLite consensus disorder prediction 69 152 - -
Alju02g2024 152 Gene3D - 2 104 IPR012677 -
Alju02g2024 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Alju02g2024 152 CDD RRM2_NsCP33_like 9 84 - -
Alju02g2024 152 PANTHER GEO13361P1-RELATED 3 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2024 Alju-ChrAlju02 19554169 19554901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2024 10 87 Eukaryotic Initiation Factors Gene Family AT2G23350 30.769 1.23e-06 45.1