Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2018 ATGTTGCGTTGTCTGAACAGTTCGGAGAATCTCACTGAGTCCTGCTCTGATATGGCATTGTTAGAAAGGCAAGGAGACCGGATGAAATGGCAACTACCACAGTTTAATCATCATCTTCCGAACCAGAGCTTCTTTTCTGGTAGTGGATTTGACGGTGGGTTCTCGTCTCTGCAAGTTCCCAATCCAGGGGCGATGATGATGATGATGAATAATGGCGGCAGCGGTTCTGGGCTTGGTGAGGTGGCTGCTAGTGCCGGCTCCGTGAAGCCTGACTCGGGTCGCAAAAATGGATGGCCCGAATTAGGCAAGGTGGACTTGCCCGGTGTGGGATTCGTGTCCTCTGGATTTAATGCGAACTCTGCAATTTCAAGGACTTCTAGCTGCCCGCCGTCAGCAACGACGGCGGCAGCCACGCCGACGGAGAAGATGAGATCGACAAGTGGGACAGAGAGCTTCAAGAAGAGGAAATCTGAAAAAGCTCAGATCCCAAAGGCGGTTGTGGCAGAAAATGAGAAGAACAAGAAAAGCAAAACAAGTGGTGAGGAATTAGAGGAATCCAAAGTCACAACAACCGATAATAATAATAACAATAATGACAAGAACAGAGAAACATCAGCCGAATGTTCGAAAGAGAATTCAAAAGCATCCGAGGTTCAAAATCCAAAGCCAGATTACATTCATGTCCGAGCACGTCGAGGACAAGCCACTGATAGCCATAGCTTAGCCGAAAGAGTTAGAAGGGAAAAAATTAGCGAGAGAATGAAGTACCTGCAAGGTTTAGTGCCTGGTTGTAACAAAATCACAGGAAAAGCTGGCATGCTCGATGAAATCATCAATTATGTTCAATCTCTTCAACGACAAGTAGAGTTTTTGTCAATGAAACTAGCTGCCGTAAACCCAACGATTGACTTCAACATTGACGATCTGTTTACCAAAGAGGTTTTTCCAGCTTGTGCTCCCACAAGTTTTCCAGCCATAGATATGACATTGACACCTAATCCTGCTGCCTATCTTCATCAGTTTGATCCAACACAACATGTTGATATGGACATTATCAACCCTCCAGATTTAGGCCTTCGAAGGACCATTAGTGCCCCTCTATCTTTGCCTCACGAAACGTTTCTTGACTCTTCCTGTTTCAATCAAATTATGCCATTTTCAACCTGTGAGGGTGATTTACAGAACCTGTACAATGTGACTTTTGAACAAGCCGGATCAACGACGTCGTCTTTTCCTTCTCAGCCATTCACAGGCCTAATTGAAGCTAGCAATCTAAAGATGGAAATGTGA 1290 0.4519 MLRCLNSSENLTESCSDMALLERQGDRMKWQLPQFNHHLPNQSFFSGSGFDGGFSSLQVPNPGAMMMMMNNGGSGSGLGEVAASAGSVKPDSGRKNGWPELGKVDLPGVGFVSSGFNANSAISRTSSCPPSATTAAATPTEKMRSTSGTESFKKRKSEKAQIPKAVVAENEKNKKSKTSGEELEESKVTTTDNNNNNNDKNRETSAECSKENSKASEVQNPKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQGLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPTIDFNIDDLFTKEVFPACAPTSFPAIDMTLTPNPAAYLHQFDPTQHVDMDIINPPDLGLRRTISAPLSLPHETFLDSSCFNQIMPFSTCEGDLQNLYNVTFEQAGSTTSSFPSQPFTGLIEASNLKMEM 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2018 429 MobiDBLite consensus disorder prediction 121 223 - -
Alju02g2018 429 MobiDBLite consensus disorder prediction 168 188 - -
Alju02g2018 429 SMART finulus 240 290 IPR011598 GO:0046983
Alju02g2018 429 Pfam Helix-loop-helix DNA-binding domain 238 285 IPR011598 GO:0046983
Alju02g2018 429 CDD bHLH_AtBPE_like 224 309 - -
Alju02g2018 429 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 232 303 IPR036638 GO:0046983
Alju02g2018 429 Gene3D - 231 303 IPR036638 GO:0046983
Alju02g2018 429 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 138 342 IPR024097 GO:0006355
Alju02g2018 429 MobiDBLite consensus disorder prediction 121 146 - -
Alju02g2018 429 FunFam Basic helix-loop-helix transcription factor 231 303 - -
Alju02g2018 429 MobiDBLite consensus disorder prediction 147 162 - -
Alju02g2018 429 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 234 284 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2018 Alju-ChrAlju02 19449921 19452247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2018 145 397 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 47.348 9.05e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju02g2018 HLH 9.7e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g2018 02 19449921 19452247 Alju02g2018 02 19449921 19452247 ECH