Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1977 ATGGCTTCTTCAAGCGGAACATCTTCAGGTTCAGGTTCAGGGTCATCGTCTCTGCTTCAAAATTCTGGTTCAGAGGAGGATTTGCAGGTTCTGATGGATCAGAGGAAGAGGAAGAGGATGATATCGAATCGTGAGTCAGCAAGGCGATCTCGTATGAGAAAGCAGAAGCATCTGGACGATCTGGTGGCTCAAGTGGCTCAGCTGAGAAAAGAGAATCAGCAGATTCTCACAAGCGTTAATCTCACCACAGAGCAGTACTTAAGGGTTGAATCTGACAACTCTGTTCTTCGAGCTCAAGCCAGTGAGCTGAGCCACAGGCTGGATTCTCTGAACGAAATAATCGATTACTTGAACTTGAATGCCAGCAACAATGGAGCTTTTACTGCAAATACCTTCATTGAGCCCAACAATGGCTTCTTCAATCCAATGAACATGGGATATCTGAACCATCCGATCATGGCTTCTGCAGATTTGTGGCCCTAA 483 0.4596 MASSSGTSSGSGSGSSSLLQNSGSEEDLQVLMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVAQLRKENQQILTSVNLTTEQYLRVESDNSVLRAQASELSHRLDSLNEIIDYLNLNASNNGAFTANTFIEPNNGFFNPMNMGYLNHPIMASADLWP 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1977 160 CDD bZIP_plant_GBF1 36 86 IPR045314 GO:0003700|GO:0006355
Alju02g1977 160 MobiDBLite consensus disorder prediction 1 54 - -
Alju02g1977 160 Coils Coil 51 78 - -
Alju02g1977 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 156 - -
Alju02g1977 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 96 IPR004827 GO:0003700|GO:0006355
Alju02g1977 160 FunFam BZIP transcription factor 33 84 - -
Alju02g1977 160 Pfam bZIP transcription factor 35 89 IPR004827 GO:0003700|GO:0006355
Alju02g1977 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 38 53 IPR004827 GO:0003700|GO:0006355
Alju02g1977 160 MobiDBLite consensus disorder prediction 29 54 - -
Alju02g1977 160 SUPERFAMILY Leucine zipper domain 35 87 IPR046347 GO:0003700|GO:0006355
Alju02g1977 160 Gene3D - 33 92 - -
Alju02g1977 160 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Alju02g1977 160 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1977 Alju-ChrAlju02 19075344 19075826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1977 31 157 bZIP Transcription Factor Family AT4G34590 59.398 9.80e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju02g1977 bZIP_1 7.5e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1977 02 19075344 19075826 Alju02g1977 02 19075344 19075826 ECH