Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1962 ATGGGCGATGCTCAGGGCGGAGGTTGTTGCCCGCCGATGGATCTTTTCCGGTCGGAGCCGATGCAGCTGGTTCAGCTCATCATTCCCATGGAGTCTGCTCATCTTACTGTCTCGTACCTCGGTGATCTAGGTCTTCTTCAGTTCAAAGATCTCAATGTTGAGAAGAGCCCTTTTCAACGGGCTTATGCAAGTCAGCTAAAAAGATGTGGAGAGATGGCAAGGAAGTTACGATTTTTCAAGGAACAAATGTTGAAGGCTGGTGTTTCATCTACAACTTTTGCTACTCAAGTTGATGTGAATATAGATGATTTAGAGGTAAAACTTGCTGAGCTTGAGGCAGAATTAGCTGAGATGAATGCAAATGGTGAAAAGTTGCAGCGGTCTCACAATGAACTTGTGGAATATAAGCTCGTTCTTCAGAAGGCTGGAGAGTTTTTCCATTCAGCTCACAATCGTGCCTTTGAGCAGCAGAGAGAACTTGAATCTTGTCACAGTGGAGAATCTATGGAAACACCTTTATTACAAGATCAAGAAATGTCAACAGATTCATCAAAGCAAGTGAACTTGGGTTTTCTAGCTGGTCTTGTTCCCAGGGAAAGATCCATGGCATTTGAGAGAATTTTATTTCGTGCTACTAGGGGCAATGTGTTTCTGAGGCAGGTCATTGTTGAGGATCCTGTCACAGACCCTGTTTCTAGAGAAAAGATTGAGAAAAATGTATTTTTAGTCTTCTATACTGGTGAAAGAGCAAAAGCCAAGATTCTGAAAATTTGTGAAGCCTTTGGAGCAAATCGTTATCCTTTTGCTGAGGAATCAGGAAAACAGGCTCAAATGATTGCAGAGGTTTCAGCAAGACTCTCAGAGTTGAAGACTACCATAGATACTGGACTGCTGCACCAGGGTAACTTGCTACAGACTATTGGCGATCAATTTGATCATTGGAATCTTTTGGTGAGAAAGGAGAAATCCATATATCATACCCTGAACATGCTTAGCCTTGATGTGACCAAAAAATGCCTCGTGGCTGAGGGTTGGAGTCCTCTTTATGCAACAAAGCAGATACAGGAAGCCTTGGACCGGGCAGCGTTTGACTCTAACTCCCAAGTTGGTTCCATTTTCCAAGTTTTGCATACTAGGGAGCCACCACCCACCTATTTCCAGACAAATAAATTCACTTCTTCATTTCAAGTTATTGTTGATGCATACGGGGTGGCTAAGTATCAGGAGGCAAATCCTGCTGTATATACCATAATTACCTTTCCATTTCTTTTTGCGGTAATGTTTGGTGATTGGGGGCATGGAATATGTTTACTACTTGGAACTTTGTATTTAATAATCAGGGAGAAGAAGTTTTCTCGCCAGAAGCTTGGAGATATTATGGAAATGACTTTTGGAGGTCGTTATGTTATTTTGATGATGTCCCTCTTCTCAGTCTTCACTGGTTTGATCTATAATGAGTTCTTCTCTGTCCCATTTGCACTCTTTGCTCCCTCAGCATATTCATGCCGTGACTTTTCTTGCAGAGATGCAACTACCGAAGGTTTGATAAAAGTGCGTCCCACATACCCATTTGGAGTGGACCCTGTATGGCATGGGACAAGAAGTGAATTGCCATTCCTGAATTCATTGAAAATGAAGATGTCAATTCTTCTTGGGGTGGCTCAGATGAACCTTGGAATCATAATAAGCTTTTTCAATGCCAAATTCTTTGGCAATGGCCTGAATGTATGGTTCCAATTTATTCCCGAGATCATATTTCTCAACAGTTTGTTTGGTTACCTATCCCTCCTTATCATTGTGAAGTGGTGCACTGGTTCACAAGCTGATTTGTACCATGTAATGATCTACATGTTCCTGAGTCCTACAGATGATTTGGGAGAAAACCAGCTCTTTCCTGGTCAGAAAACTTTACAGCTTGTACTGCTACTTCTGGCCTTTGTCTCTGTGCCCTGGATGTTGATACCGAAACCTTTTCTTTTGAAGAAGCAACACGATAGGCACCAGGGTGAATCCTATGCACCACTTGAAAGCACGGAGGAGAGCTTGCTTGTGGAGTCAAATCATGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTGCATCAACTCATACACACCATTGAATTTGTACTTGGAGCAGTGTCTAATACTGCTTCTTACCTTCGTCTATGGGCTCTTAGCCTTGCACATTCGGAGTTGTCAAGTGTTTTCTATGAAAAGGTCCTTCTTCTTGCGTGGGGGTACAACAATGTGATCATTCTTATAGTGGGTTTCATTGTCTTTGTTTTTGCAACTGTGGGGGTGTTACTTGTGATGGAAACCCTCAGCGCCTTCCTCCATGCTCTGCGTCTTCACTGGGTGGAGTTCCAAAATAAGTTCTATGAGGGAGATGGTTACTTGTTCCATCCTTTCTCGTTCGCGTTGCTTGATGATGAAGATGAGTGA 2454 0.4262 MGDAQGGGCCPPMDLFRSEPMQLVQLIIPMESAHLTVSYLGDLGLLQFKDLNVEKSPFQRAYASQLKRCGEMARKLRFFKEQMLKAGVSSTTFATQVDVNIDDLEVKLAELEAELAEMNANGEKLQRSHNELVEYKLVLQKAGEFFHSAHNRAFEQQRELESCHSGESMETPLLQDQEMSTDSSKQVNLGFLAGLVPRERSMAFERILFRATRGNVFLRQVIVEDPVTDPVSREKIEKNVFLVFYTGERAKAKILKICEAFGANRYPFAEESGKQAQMIAEVSARLSELKTTIDTGLLHQGNLLQTIGDQFDHWNLLVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPLYATKQIQEALDRAAFDSNSQVGSIFQVLHTREPPPTYFQTNKFTSSFQVIVDAYGVAKYQEANPAVYTIITFPFLFAVMFGDWGHGICLLLGTLYLIIREKKFSRQKLGDIMEMTFGGRYVILMMSLFSVFTGLIYNEFFSVPFALFAPSAYSCRDFSCRDATTEGLIKVRPTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISFFNAKFFGNGLNVWFQFIPEIIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFPGQKTLQLVLLLLAFVSVPWMLIPKPFLLKKQHDRHQGESYAPLESTEESLLVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNVIILIVGFIVFVFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYLFHPFSFALLDDEDE 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1962 817 PANTHER VACUOLAR PROTON ATPASES 15 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
Alju02g1962 817 Pfam V-type ATPase 116kDa subunit family 39 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Alju02g1962 817 PIRSF ATP6V0A1 11 817 IPR026028 GO:0000220|GO:0046961
Alju02g1962 817 Coils Coil 94 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1962 Alju-ChrAlju02 18928960 18937474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1962 13 817 Primary Pumps ATPases(2) AT4G39080 78.863 0.0 1313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1962 02 18928960 18937474 Alju02g1962 02 18928960 18937474 ECH