Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1960 ATGTTGAGAGAGATGATAAGAGAAGGAAAAGGAAGAGAAGTGACCAAATGCCAAGACTGTGGGAACCAAGCAAAGAAGGGCTGTGAATTCATGAGATGCAGAACTTGTTGTAACAATAAAGGCTTTGGCTGCCGAACTCATATCAACAGTACTTGGGTTCCTAACTCTAGGAGACGCCATCTTCACCCTCAATTCCTCACTCACTCTAATAATCCATCTCCAGGAATAGAGGAACTGAATAAGCTGCCGGCTGCGACGAGTTCGGCGGCGGTGTTCCGGTGCGTTCGGGTGCGTTCGGAGGATGATACGGTGGACGAATATGCATATCAAACGTCTGTGAATATAGGAGGACGCGTGTTTAGTGGTGTTCTTTATGATCAAGGCCCTGAAAGCTTATTCTCCTATAATAATTGCAACGTTGGTGCTCAAACTTCGTTCAAAGCCCCTTTGAATATGATTCATCATCAGCATGGTCACCATTTCATGGACACTTCAATGATTCAATCCCATGATGTTGCTCATGCTGTCACTTCTACTGTGCCTCCATTAATGATCTCACAGGTCTCTTCTGCTGAGCAATTTTCTTCTTCTTCGTCCCATCCTCTTTCACTTGGAACCTTTAGGCCTCCTGTATCATATTTCTCTCAACCAAAGACTTAA 660 0.4455 MLREMIREGKGREVTKCQDCGNQAKKGCEFMRCRTCCNNKGFGCRTHINSTWVPNSRRRHLHPQFLTHSNNPSPGIEELNKLPAATSSAAVFRCVRVRSEDDTVDEYAYQTSVNIGGRVFSGVLYDQGPESLFSYNNCNVGAQTSFKAPLNMIHHQHGHHFMDTSMIQSHDVAHAVTSTVPPLMISQVSSAEQFSSSSSHPLSLGTFRPPVSYFSQPKT 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1960 219 NCBIfam putative zinc finger domain, LRP1 type 16 58 IPR006510 -
Alju02g1960 219 Pfam Domain of unknown function (DUF702) 15 69 - -
Alju02g1960 219 Pfam Domain of unknown function (DUF702) 79 130 - -
Alju02g1960 219 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 9 69 IPR007818 GO:0003700|GO:0006355
Alju02g1960 219 NCBIfam LRP1 C-terminal domain 82 129 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1960 Alju-ChrAlju02 18907252 18908015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1960 16 128 C2H2 Transcription Factor Family AT2G21400 51.145 6.62e-39 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Alju02g1960 DUF702 1.3e-18 No_clan