Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1957 ATGAAGATCCAATGTGATGTGTGTGAGAAATTGGAAGCTTCAGTGTTCTGTGCTGCAGACGAAGCTGCTCTCTGCCATGGATGTGATTCAAGTATCCACCATGCCAACAAGCTCGCTGGCAAACACACACGCTTCTCTCTTCACCACCCCGCCTCTAAAGATTCACCTCTCTGTGATATCTGCCAAGAGAAGCGAGCATATCTATTCTGCAAAGAAGACAGAGCAATATTATGCAGAGACTGTGACGTTAACATCCACATAGCCAATGAACACACCCAGAAACACGATAGGTTTCTTCTCACAGGCGTCAAGCTTTCTGATTCTTCTTCTTCTTCTTCTTCTGGGGACCCATCTTCATCTTCCTGCAATAATTCCATAACCACTGAGCATAAAGGGGTCGATAATAATAATAATGAACGTCGTGAAGCAAGAAGATCGAGTCGGAATAATTATTCTAACACAATGAACAGAGCCAGATGGGATTGCAATAATGAGAATTTCAGTTCTTCTGTGAATTCGGATACTATGGTTAGTGACACAGAAGCAGTTTCTACGAGCAGCTTTTCTGAGTATTTGATTGAGACGATACCTGGGTTTTGCTTTGAAGACCTGATTGATTCTTCGTTCCCACCTCACTGATGGGCTCATGGGCATGAACCTACATTTGATGATAATATTTTGAAGATCTTCAAGTTAGAATGTGTCTATATCCAAAAACAGTCGCAGCGAAAGAAATGTGGAAATGGAAGCAAAATGGCTTCCGCTAATCTGTTCAACTGTTTTGCTTAA 789 0.4195 MKIQCDVCEKLEASVFCAADEAALCHGCDSSIHHANKLAGKHTRFSLHHPASKDSPLCDICQEKRAYLFCKEDRAILCRDCDVNIHIANEHTQKHDRFLLTGVKLSDSSSSSSSGDPSSSSCNNSITTEHKGVDNNNNERREARRSSRNNYSNTMNRARWDCNNENFSSSVNSDTMVSDTEAVSTSSFSEYLIETIPGFCFEDLIDSSFPPHXWAHGHEPTFDDNILKIFKLECVYIQKQSQRKKCGNGSKMASANLFNCFA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1957 262 CDD Bbox1_BBX-like 5 47 - -
Alju02g1957 262 SMART bboxneu5 53 100 IPR000315 GO:0008270
Alju02g1957 262 SMART bboxneu5 4 47 IPR000315 GO:0008270
Alju02g1957 262 CDD Bbox1_BBX-like 57 100 - -
Alju02g1957 262 MobiDBLite consensus disorder prediction 109 155 - -
Alju02g1957 262 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 217 - -
Alju02g1957 262 MobiDBLite consensus disorder prediction 133 147 - -
Alju02g1957 262 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Alju02g1957 262 MobiDBLite consensus disorder prediction 109 132 - -
Alju02g1957 262 Gene3D Classic Zinc Finger 1 99 - -
Alju02g1957 262 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Alju02g1957 262 FunFam B-box zinc finger protein 21 1 98 - -
Alju02g1957 262 Pfam B-box zinc finger 55 92 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1957 Alju-ChrAlju02 18876702 18877996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1957 1 233 C2C2-CO-like Transcription Factor Family AT1G75540 48.101 3.34e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Alju02g1957 zf-B_box 3.8e-08 No_clan