Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1945 ATGAAGCTCCTCAAATTCTCTCACCTCACTATGTTCATCTTCTTCCTCGTTATGTTGCCCGATCCTGGAACCGCTCATGATTACCGAGAAGCATTGTCGAAAGCGATCTTGTTCTTCGAGGGCCAGCGATCGGGGTACCTGCCGGACGACCAGAGAATGAAATGGAGAGGCCATTCAGGGCTGAGCGACGGGTGGGCTTACAACACAGACCTCACCGGCGGCTACTACGACGCCGGCGACAACGTCAAGTTCGGGTTCCCGATGGCGTTCACCGCCACAATGCTGGCTTGGAGCGTCATCGAATTCGGAGATGAGATGCCTCCTCAGGAGCTTCGGAATTGCCTCGTCGCTATTCGCTGGACCACCGATTATCTGCTCAAGACTGTGTCTCAGCCCGATCGGATTTTTGTTCAGGTGGGGGATCCGAGCTCAGACCACAACTGTTGGGAGAGGCCAGAGGACATGGACACAGACAGGACGGTTTACGCCATCGATGCGCCGAATCCAGCCTCCGACGTTGCCGGAGAAACAGCGGCGGCGTTGGCCGCTTCTTCCATGGCGTTCCGGTCGTCGGACCCCGGATATTCGGAGACACTGCTACGAAATGCGATCAAGGCATTTCAGTATGCTGATAACTACAGAGGTGCTTACACGGACAATGATCATGTTAGGGAAGGTGCTTGCCCTTATTACTGCAACTTTGGAGGCTACCAGGACGAGCTGTTATGGGGAGCAGCATGGCTAAGGAGGGCAACAGGGGAAGATGATTTCTTAAACTACCTTCAATACAATGCCAAAGCTTTCGGTGCTGAAGAGAACATCAATGAGTTTGGCTGGGAAAACAAGCATGCTGGCCTTAAAGTACTTGTCTCCAAGGAAGTAGTAGAAGGAAGCATGGACTCTCTACAATCCTATAGGGAGTCAGCAGAGAGCTTCATATGCACACTGGTACCTCAATCACCAGCCTCACAAATCCAATACACTCCTGGAGGCCTCATTTACAGACCTGGAGGCAGCAATTTACAGCATTCAACTTCTCTCTCCTTCCTTCAACTCGTGTACGCCAACTATCTCTCTCGCTCCTCCCAAACCCTAACTTGTGGGACCCTCTCCGACATCACTCCGGCCACCCTCCGTCGCATCGCCAAGAGACAAGTTGACTACATCCTCGGCGACAACCCCATGGGACTGTCCTACATGGTCGGATACGGCGACCACTACCCTCAGAGGATCCACCACCGTGGCTCTTCTCTTCCTTCTACTAAGTACCACCCTCAGTTCATCGCTTGCAAGGAAGGCTCTGTCTATTTCAATTCTTCTAACCCTAACCCTAATCTTCTTGTCGGGGCTCTTGTCGGAGGGCCTGAGGAAGATGATGAGTACGAGGATGATCGAGCTAATTTCAGAAAGTCTGAGCCCACTACCTATATTAATGCTCCTTTTGTTGGGGTTTTAGCGTACTTTGCCGCTCATCCTGACCCTTGA 1485 0.5219 MKLLKFSHLTMFIFFLVMLPDPGTAHDYREALSKAILFFEGQRSGYLPDDQRMKWRGHSGLSDGWAYNTDLTGGYYDAGDNVKFGFPMAFTATMLAWSVIEFGDEMPPQELRNCLVAIRWTTDYLLKTVSQPDRIFVQVGDPSSDHNCWERPEDMDTDRTVYAIDAPNPASDVAGETAAALAASSMAFRSSDPGYSETLLRNAIKAFQYADNYRGAYTDNDHVREGACPYYCNFGGYQDELLWGAAWLRRATGEDDFLNYLQYNAKAFGAEENINEFGWENKHAGLKVLVSKEVVEGSMDSLQSYRESAESFICTLVPQSPASQIQYTPGGLIYRPGGSNLQHSTSLSFLQLVYANYLSRSSQTLTCGTLSDITPATLRRIAKRQVDYILGDNPMGLSYMVGYGDHYPQRIHHRGSSLPSTKYHPQFIACKEGSVYFNSSNPNPNLLVGALVGGPEEDDEYEDDRANFRKSEPTTYINAPFVGVLAYFAAHPDP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1945 494 FunFam Endoglucanase 24 492 - -
Alju02g1945 494 SUPERFAMILY Six-hairpin glycosidases 16 490 IPR008928 GO:0005975
Alju02g1945 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Alju02g1945 494 Gene3D - 24 491 IPR012341 GO:0005975
Alju02g1945 494 PANTHER ENDO-1,4-BETA-GLUCANASE 14 489 - -
Alju02g1945 494 Pfam Glycosyl hydrolase family 9 28 485 IPR001701 GO:0004553|GO:0005975
Alju02g1945 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1945 Alju-ChrAlju02 18724900 18728212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1945 13 491 Glycoside Hydrolase AT1G70710 59.959 0.0 598