Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1927 ATGGGTTTTCGTCTGCCTGGAATAAGAAGGCGTTCCTCTTCTGCAACAGAATCTGCTATGAAAACAGTGGATGTCCCAAAGGGCTACCTTGCAGTTTATGTTGGAGAGAGATTGAAACGCTTTGTTATTCCTATATCATACTTGAATCAACCTTCATTCCAGGAATTACTTAGTCAAGCTGAAGAAGAGTTTGGTTATGATCATCCAATGGGTGGCCTCACAATTCCTTGCCCTGAAGAGTCCTTTGAGAATATAATTTCTGTCTTGAATGAGTCTGCCTTTGAAAATATTTTGGCAGCTTATGAATTTGGTTTCAATCATTTCTGCGTAGCAGGTCTGTATTTAAAAGTATTTAGACAGCTTATGAGATTCATCTTCGATTTCCCAGACGAACTTATAATTGATATGACCAACAGCTCATCTTCGAAAAAGCACGGTCAAGATCAGTCTGAAATTAGTGGTCCCACTCCCAAATCACAGCGAACCAAAATGGGGAAATCCGAGGACAATGAGAAAAAGAACTTGGGTAAGAAACTCAAGGATGTGGAAATAAGCGTTCCAATAGTGTATGGTAACGTTGCATTCTGGCTTGGCAAGAAGGCAAGCGAGTATCAGTCACATAAATGGACTGTGTATGTTCGTGGAGCAACCAATGAGGACCTTGGGGTGGTCATAAAGCGTGCTGTTTTTCAGCTGCATTCTAGTTTCAACAATCCAACAAGGGTTGTGGAGTCACCTCCTTTTGAGTTGTCAGAATCAGGATGGGGTGAATTTGAAGTTGCCATCACACTTCATTTCCACAGCGATGTTTGTGACAAGCCTTTGAATCTATTTCATCACTTGAAGTTATATCCAGACGATGAGAACAGTTCCATGTCAATAAAAAAGCCTGTTGTTGTGGAATCATATGATGAGATAGTTTTCCCTGATCCTTCTGAAGCTTTTTTAGCTCGTGTGCAAAACCATCCAGTAGTGAACTTTCCAAGATTGCCTGCCGGAATAACCTTACCTCATCCAATACCTATTGAAGATGCAAGCAAAAGGAGGAGAGGTGATACTAAAGATCATCCACTAACCCAATGGTTCACAAATTTCTCTGAAGCAGATGAGCTCTTACAGCTTGCTGCAGCTCGTCAGCAGGTTCAAGCTCATATTGCTAAACTCAGACGACAGATAAGTTTGATAGATGGGCAGCATCAGCAGTTCAAGTCTTCCTCTGACCAGTAG 1227 0.4156 MGFRLPGIRRRSSSATESAMKTVDVPKGYLAVYVGERLKRFVIPISYLNQPSFQELLSQAEEEFGYDHPMGGLTIPCPEESFENIISVLNESAFENILAAYEFGFNHFCVAGLYLKVFRQLMRFIFDFPDELIIDMTNSSSSKKHGQDQSEISGPTPKSQRTKMGKSEDNEKKNLGKKLKDVEISVPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNNPTRVVESPPFELSESGWGEFEVAITLHFHSDVCDKPLNLFHHLKLYPDDENSSMSIKKPVVVESYDEIVFPDPSEAFLARVQNHPVVNFPRLPAGITLPHPIPIEDASKRRRGDTKDHPLTQWFTNFSEADELLQLAAARQQVQAHIAKLRRQISLIDGQHQQFKSSSDQ 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1927 408 MobiDBLite consensus disorder prediction 139 161 - -
Alju02g1927 408 FunFam Transcription initiation factor TFIID subunit 14 179 332 - -
Alju02g1927 408 Gene3D YEATS domain 179 331 IPR038704 -
Alju02g1927 408 Coils Coil 371 391 - -
Alju02g1927 408 Pfam Auxin responsive protein 10 89 IPR003676 GO:0009733
Alju02g1927 408 MobiDBLite consensus disorder prediction 139 174 - -
Alju02g1927 408 Pfam YEATS family 206 285 IPR005033 GO:0006355
Alju02g1927 408 PANTHER PROTEIN AF-9 HOMOLOG 174 406 IPR005033 GO:0006355
Alju02g1927 408 CDD YEATS_TFIID14_like 184 315 - -
Alju02g1927 408 ProSiteProfiles YEATS domain profile. 178 322 IPR005033 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1927 Alju-ChrAlju02 18535784 18543567 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1927 24 89 Calmodulin-binding Proteins AT3G43120 54.545 1.75e-18 80.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1927 02 18535784 18543567 Alju02g1927 02 18535784 18543567 ECH