Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1904 ATGGTCATAGCTCTTCAGTGGGTGGTGGGGTCTAACTCTGTCAGTAGTGCGTTACATGATTGTCAGAAAAGTAAATTCCTTCATTCTTTTTCCCTGTCTTCTTATCCTCATTTGATCAGTGTGAATCTTTTCTCTTCCCTCGCAACAATGGCAAACCCTAAGGTCTTTTTTGATATGACCGTCGGCGGTCAACCTGCTGGCCGAATCGTCATGGAGCTTTTCGCCGATACCACCCCCAGGACCGCAGAGAACTTCCGTGCTCTCTGCACTGGCGAGAAGGGAGCTGGTCGCAGCGGCAAGCCGCTTCACTACAAGGGCTCCTCTTTTCACCGTGTGATCCCCGATTTCATGTGCCAGGGAGGTGATTTCACCGCTGGAAATGGCACTGGTGGCGAGTCGATTTATGGTGCCAAGTTCGCCGACGAGAACTTCATTAAGAAGCACACCGGTCCTGGTGTCCTTTCCATGGCGAATGCTGGCCCTGGAACCAACGGATCTCAGTTCTTCGTTTGCACGGCCAAGACTGAGTGGCTCGACGGCAAGCACGTGGTGTTCGGCCAAGTCGTGGAGGGCATGGATGTGGTTAGGGAGATCGAGAGGGTCGGGTCTAGATCTGGCAAGACATCCAAGCCAGTGGTGATTGCTAACTGCGGGCAACTTTAG 663 0.5294 MVIALQWVVGSNSVSSALHDCQKSKFLHSFSLSSYPHLISVNLFSSLATMANPKVFFDMTVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGAGRSGKPLHYKGSSFHRVIPDFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGVLSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVREIERVGSRSGKTSKPVVIANCGQL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1904 220 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 104 121 IPR020892 GO:0003755|GO:0006457
Alju02g1904 220 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 56 219 IPR002130 GO:0000413|GO:0003755
Alju02g1904 220 SUPERFAMILY Cyclophilin-like 43 220 IPR029000 -
Alju02g1904 220 Gene3D - 43 220 IPR029000 -
Alju02g1904 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 88 IPR002130 GO:0000413|GO:0003755
Alju02g1904 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 121 IPR002130 GO:0000413|GO:0003755
Alju02g1904 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 167 IPR002130 GO:0000413|GO:0003755
Alju02g1904 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 167 179 IPR002130 GO:0000413|GO:0003755
Alju02g1904 220 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 180 195 IPR002130 GO:0000413|GO:0003755
Alju02g1904 220 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 56 218 IPR002130 GO:0000413|GO:0003755
Alju02g1904 220 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 54 220 - -
Alju02g1904 220 CDD cyclophilin_ABH_like 53 218 - -
Alju02g1904 220 FunFam Peptidyl-prolyl cis-trans isomerase 49 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1904 Alju-ChrAlju02 18312095 18314036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1904 29 201 U-box Gene Family AT5G67530 43.820 1.32e-29 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1904 02 18312095 18314036 Alju02g1904 02 18312095 18314036 ECH