Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1878 ATGACTGTTAAGAGGAAAAACGTGTTGGTTGGGATTAAAATCGATAGCCAAAGCAGGCAACTTCTAAATTGGGCTCTTGTCAAAGTTGCTCAACCTGGAGATTGTGTTGTTGCAGTTCATGTGGTCAAATGTCGAGGTCATGTTTCAAAAAACAAGCCCCTTCTGGATAATTATTTAGAGGTTTATGATGGCCTATGTGACGTGAAAAAAGTAAGTCTCGTAGGGCAAATCTTCAAAGGGAGATCCATTCGAAAAATTCTTGTGAGAGAGTCAAAGAACAATTCTGCTCTGGCTTTAGTGGTTGGTGGTGGTACTGCCACAGCTAAACATTGCGCCAAACGACTCTCACCCACCACAGATGTTGTAGCCATCGAGGATGGAAAAACTGTCTTCAGAAGGTGTACCAATCTTAAACTACCAGTACCAGGTCTTATACAAGATCCAAGGCCTAGTCTCAAAAGCATGAACGACAAAGAAATCCTGTCTGAATATGCAGACTCCGAGGTTGGAACTGTGAAATCAATATGTTGTGAGGAGACAAGAGAAGACGTCCCAGAATTGAAACAAGTATCTGACGATGTTGAAGGGAGCAAGAAAGTGTGTTCAAGAGCAATATCTCTGCTTGTAGGAGACCCTTGTGAGCAGAAACTAGGATGGCCCTTGCTCCGGAGAGTTAATTCAGAGATATCAGAGCCAGGGACACCTCTTGCAAGGAACTTGTCTGTAGTGCAATGGGTAATGAACTTACCAGATCGTTCTCCAAAGAAAAGTTCTTGCTTTTCATCCACAGAAGGAAGTCCCTCAGAAAGAGGCATAAGTGATTTTGAGGATGACAGACAGAAAAACAGTTCATGTTCTTCATCTTTTGAGCTACCAAAGGAATTGGAGGGGATTTTGCACTTGAATTTATTTAATTGCAAGTGGTTTAACTATGAGGATCTCAAGTCCTGGACTTCTCAATTCTCTTCAGGAAATCTGATTGGGAAAGGAGGGAGTAACCGTGTGTACAAAGGGATTCTTCCTGATGGAAAACCAATTGCAGTCAAAGTTTTACAATCATCAAAAGTGGCTTGTAAAGATTTTGCTCAGGAAGTGGAAATAATATCCTCTCTGAAGCATAAATACATAACCCCTTTGCTCGGAATTTGCATCTCAGAAAATGCTTTAATCTCTGTCTATGAGTTTTTCCCTAAAGGAAGCTTGGGGGAAAACTTACACGTTGAGAACAAGGATGGATCCATATTGTCATGGCAAGTGAGATTCAATATGGCTGTTGGTATAGCAGAAGCCCTCAATTACCTTCATAACGAAACTTCAAAGCCCGTCATACACAGAGATGTCAAGTCTTCAAATATTCTTCTCTCCCATGGCTTTGAACCACAATTGACTGATTTTGGACTTGCAATTTGGGGACCAACAAGTTCATATTTTCTGACACAAGAAGATATAGTAGGAACATTCGGATATCTTGCTCCTGAATACTTCATGTATGGAAAAATAAGTGACAAGATAGATGTGTACGCCTTTGGTGTAGTTCTTCTTGAACTAATCTCAGGAAGGAAACCAATCAGTTCCGAGATTTGCAAAGGAAAAGAAAGTTTGGTTGCGTGGGCAAAACCAATAATAGAGAGCGGGAATGTTAAAGGCTTATTGGACTCCAATTTAGAGGGGAAATTTGATGAGGTCCAAATGCAGAGAATGGTTAAGGCAGCAAATCTATGCATGACAAGGGCTGCTAGGCTTCGTCCCAACATTAACCAGATACTGAAGATCCTGCAAGGAGAAGAAAGAGATGAGAGTTTTATGAGACCATCTCTAGGGTTTGATGATAATAATGAGAATACAGAAAACCAGGAGAACATAGACGACGAAGTGTATCCAAATTCAAGTGCAGAGTTACACCTAAGTCTGGCATTACTTGATGTTGTTGATGACTACTCTACATCGTATAGCAGTAGTACAGAGCGGAGCAACAGTCTTTCTTTGGAAGAACACTTGAAAGAAAGATGGAGCAGATCATCCAGTTTTGATTAG 2034 0.409 MTVKRKNVLVGIKIDSQSRQLLNWALVKVAQPGDCVVAVHVVKCRGHVSKNKPLLDNYLEVYDGLCDVKKVSLVGQIFKGRSIRKILVRESKNNSALALVVGGGTATAKHCAKRLSPTTDVVAIEDGKTVFRRCTNLKLPVPGLIQDPRPSLKSMNDKEILSEYADSEVGTVKSICCEETREDVPELKQVSDDVEGSKKVCSRAISLLVGDPCEQKLGWPLLRRVNSEISEPGTPLARNLSVVQWVMNLPDRSPKKSSCFSSTEGSPSERGISDFEDDRQKNSSCSSSFELPKELEGILHLNLFNCKWFNYEDLKSWTSQFSSGNLIGKGGSNRVYKGILPDGKPIAVKVLQSSKVACKDFAQEVEIISSLKHKYITPLLGICISENALISVYEFFPKGSLGENLHVENKDGSILSWQVRFNMAVGIAEALNYLHNETSKPVIHRDVKSSNILLSHGFEPQLTDFGLAIWGPTSSYFLTQEDIVGTFGYLAPEYFMYGKISDKIDVYAFGVVLLELISGRKPISSEICKGKESLVAWAKPIIESGNVKGLLDSNLEGKFDEVQMQRMVKAANLCMTRAARLRPNINQILKILQGEERDESFMRPSLGFDDNNENTENQENIDDEVYPNSSAELHLSLALLDVVDDYSTSYSSSTERSNSLSLEEHLKERWSRSSSFD 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1878 677 ProSiteProfiles Protein kinase domain profile. 321 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1878 677 MobiDBLite consensus disorder prediction 660 677 - -
Alju02g1878 677 MobiDBLite consensus disorder prediction 649 677 - -
Alju02g1878 677 FunFam Putative receptor-like serine/threonine-protein kinase 396 606 - -
Alju02g1878 677 PANTHER OS08G0249100 PROTEIN 199 618 IPR046958 -
Alju02g1878 677 MobiDBLite consensus disorder prediction 254 269 - -
Alju02g1878 677 MobiDBLite consensus disorder prediction 252 281 - -
Alju02g1878 677 SUPERFAMILY Protein kinase-like (PK-like) 302 592 IPR011009 -
Alju02g1878 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Alju02g1878 677 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 290 395 - -
Alju02g1878 677 SMART serkin_6 321 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1878 677 Pfam Protein kinase domain 323 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1878 677 Gene3D Transferase(Phosphotransferase) domain 1 396 604 - -
Alju02g1878 677 Gene3D Phosphorylase Kinase; domain 1 290 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1878 Alju-ChrAlju02 18057285 18060390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1878 308 616 Trihelix Transcription Factor Family AT5G38560 40.938 5.46e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Alju02g1878 Pkinase 4.3e-40 CL0016