Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1871 ATGAATGAAAAAAATGAGTCCCATGAAGCGAATAAAGTGGTATTGATTCAGACATGGGTTGGAGCTAGAGACGAAGGCACAGGGTCCCACCTCCCTCCCTCCCCCGCTGTACTGTCCCTCCCTGTTATTTTCTTCTTTTCCAAACTTGCCCTTGTCTTATTCCCATCATCCCACCGCTTCTTTTACCCCTTCTCTCTCTCCTTTATAACACCATCCTTCCCCTCTCCTTCACTTCTCACTACTGCCACCCTCAAACCCTGGTTTCTTCTTTTCTTTTCATACCATCACTCACTGAGAGAGATGTCGAAGGAAGTGAGCGAAGAAGGCCAAACCCACCATGGCAAGGACTACGTGGACCCCCCGCCTGCTCCTCTCATTGACACCGCCGAGCTCAAGCTCTGGTCTTTCTACAGAGCCCTCATCGCCGAGTTCATCGCCACCCTTCTCTTCCTCTACATCACCGTGGCCACCGTCATCGGCCACAAAAAGCAAAGCGGCCCCTGCGACGGTGTCGGCCTCCTGGGCATCGCCTGGGCCTTCGGTGGCATGATCTTCATCCTCGTCTACTGCACCGCCGGTATCTCTGGTGGCCACATCAATCCTGCGGTCACATTTGGGCTGTTCTTGGCGAGGAAGGTGTCTCTCATCCGAGCTTTGGCGTACATGGTAGCTCAGTGCTTGGGTGCGATTTGCGGTACTGGGTTGGTGAAGGCGTTCATGAAGCACTCGTACAACTCACTCGGTGGTGGGGCCAACGAAGTGAGCTCCGGCTACACCAAAGGCACTGCTCTCGGCGCTGAGATTATCGGCACCTTTGTTCTGGTGTACACTGTTTTCTCCGCCACTGACCCCAAGAGAAGTGCCCGTGACTCTCACGTTCCTGTTTTGGCTCCATTGCCCATAGGATTTGCCGTTTTCATGGTTCACTTGGCTACCATCCCCATCACTGGAACAGGGATAAACCCAGCAAGGAGCTTAGGGGCTGCTGTTATTTACAACAATGGCAAAGCTTGGAACGACCATTGGATCTTCTGGGTTGGTCCATTTGTGGGAGCATTGGCGGCGGCAGCGTATCACCAGTATATTCTGAGAGCAGCAGCGATCAAGGCATTGGGATCGTTCCGGAGCAACCCCTCCAACTAA 1143 0.5346 MNEKNESHEANKVVLIQTWVGARDEGTGSHLPPSPAVLSLPVIFFFSKLALVLFPSSHRFFYPFSLSFITPSFPSPSLLTTATLKPWFLLFFSYHHSLREMSKEVSEEGQTHHGKDYVDPPPAPLIDTAELKLWSFYRALIAEFIATLLFLYITVATVIGHKKQSGPCDGVGLLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRALAYMVAQCLGAICGTGLVKAFMKHSYNSLGGGANEVSSGYTKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNGKAWNDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1871 380 PRINTS Major intrinsic protein family signature 342 362 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g1871 380 PRINTS Major intrinsic protein family signature 180 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g1871 380 PRINTS Major intrinsic protein family signature 138 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g1871 380 PRINTS Major intrinsic protein family signature 266 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g1871 380 PRINTS Major intrinsic protein family signature 217 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g1871 380 PRINTS Major intrinsic protein family signature 302 324 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g1871 380 Pfam Major intrinsic protein 131 358 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g1871 380 NCBIfam MIP family channel protein 142 358 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g1871 380 SUPERFAMILY Aquaporin-like 130 364 IPR023271 -
Alju02g1871 380 FunFam Probable aquaporin PIP1-2 123 378 - -
Alju02g1871 380 Gene3D Glycerol uptake facilitator protein. 123 380 IPR023271 -
Alju02g1871 380 ProSitePatterns MIP family signature. 198 206 IPR022357 -
Alju02g1871 380 CDD MIP 138 362 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju02g1871 380 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 106 369 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1871 Alju-ChrAlju02 17989067 17993923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1871 101 380 Major Intrinsic Protein MIP AT4G35100 89.643 0.0 524