Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1852 ATGGATTTCTCCCTCAGGAAATCCTTCAAGTCCTATGGTTCCTACAAGCGTTCCTCAGGAGACAACGCTGAGGCCAGGCACGAAGAAGTCCCCATTCTCTACGAACAAGATCAGTCTTCCGAACATCATCTTCTTCAACCCCACGTCGCCGCCATGAACTCCGCCGGAAGCCCCACCTACAGCGGAGAGGTGATCGTCAAGATCGACGACGGCGACTCCAAATCCTCCAAAGCGGCGGCCTCCTCCTCCTCCCAGCAGGGCGAGGCCAAGCTTAGGCGGGACCCCGACTTCTGGAAAGAAGGTGATATGACCGTCACCAAGCATGAGCAGAGTTTCGATTTCCAGCGACCTGATCCCAAACCCGACGACCCTCCCTCCAAGCTCATTGGTAATTTCTTGCACAGGCAGCAGCTCTCCGGCGACATGTCCCTCGATATGGATTTGGAAATGGATGAGCTTCAACATGATCCTTACAAGACGTGTTTGCCTCCTCTCGATGAGAATGCGACGGTGAGTTTCTCCAGGGAGCTCAAAGTTTCCTTCGAAGAACCGCATCCTAATTCCGCAGAGGAACCTGCAGGCGATTCCGTTCGACGAAGATACAAGGATACACCAAACATGGAGGAATTCCCGAAACCACCACAACCACCGCAGTCAGACCGTCGTGCAGGCTCAAATCAGAATATTCATTCGGCAAACAGCGGAGACAGCGAGGTTGTGAGATGCACCTCAAACGCGTCGTTCGAGAGGAACCTTTCGTTGCAGAGGAAGTCGGGTTTGCTAAGAGCGAAAACCAAATCAAGACTTATTGACCCGCCCGATGAACCCGAACGGAAATCGGGCCGCATTCAGAAATCGGGGCAGATTCAGAAATCAGGGCAGATTCAGAAATCGGGGCAGATTATGTCGGGTTTGCAGTCAGGGAATAATAAGAAAGGGGAGGAGGATGAGGAAGACCCATTTTTGGAAGAGGATCTTCCAGACGATTTCAAAAAAACCAAATTCAGCATCTGGGTTCTACTAGAATGGTTAAGTTTGATCTTAATTGTAGCGGCATTGATTACCACTCTCTGCATCCCATTCTTAAGGGGGAAAAATCTATGGAAGCTCAAGTTATGGAAATGGGAGGTGATGGTCTTGGTTCTGATCTGTGGCAGGTTAGTTTCAGATTGGGTGATTCGAATTGCGGTGTACTTCATCGAAAGAAATTTCCTTCTACGTAAGAGGGTGCTTTACTTTGTATATGGTGTGAAGAAGGCAGTTCAAAATTGCCTCTGGTTGGGGCTTGTTTTAATTGCGTGGCATTCTCTGTTCGACAAAAAAGTGGAAAGGGAGACAAAAAACGACTTCCTAGAATATGTGACCAAGGTTTTGATCTGCTTCTTGGTGGGAACTATAGTGTGGCTGGTGAAAACTCTGATGGTGAAGGTTCTGGCATCTTCGTTCCACGTCAGCACCTACTTCGACAGGATTCAGGAATCTCTGTTCAACCAGTTTGTGATCGAAACCCTGTCGGGGCCGCCGTTGGTGGAGATGCAGCGGCAGGAGGAGGAGGAGGAGAAGCTGGCGGAGGAAGTGATGAAGCTTCAGAATGCAGGAATTACTATACCGCCTGATCTGAGGGCATCAGCTTTCTCTTCTTTGAAGAGCCCGAAGGTGAATAGGAGTGGGGTGCTAAAGAGTCCTCATTTGAAAAGTGGATTTTCTCGACCACTTTCGAAGAAGTCAGATGATGGTGGGATACCTATTGATTACTTACATAAGTTGAATCCTAGGAATGTGTCTGCATGGAATATGAAGAGGCTCATGAACATTGTGCGGCATGGTGCTCTTTCTACTCTTGACGAGCAGATACAAGGTTCAGCCTATGAAGATGAACATACCACGCAAATCCGTAGTGAGAATGAGGCCAAAGCTGCAGCCAAAAAGATATTTCAGAATGTTACCAGGCGTGGATACAGGTTTATATACCTAGAGGACTTGTTGCGCTTTATGAGAGATGAAGAAGCTGTTAAAACCTTTAGTCTATTCGAAGGAGCACCTGATACCGGCAAAATCAGCAAATCAGCCTTGAAGAACTGGGTGGTGAACGCGTTCAGAGAAAGGAGAGCACTTGCTTTAACGTTGAACGACACCAAAACGGCAGTAAACAAACTTCACCGGATGCTCAATTTTCTAGTGGCCATTATCATTCTCATCATTTGGCTTTTAATACTAGAAATTGCCACCAGCAAGTTTCTTGTCGTGGTGAGCTCCCAGCTCGTTCTGGCCGCATTCATATTCGGAAATACTTGCAAGACCATATTTGAAGCCATCATTTTCTTATTTGTCATGCACCCTTTTGATGTGGGAGATCGATGTGAAATTGATGGCGTTCAGATGGTTGTGGAAGAAATGAACATATTGACAACCGTATTTCTGAGATACGACAATTTGAAAGTAACGATCCCTAACAGTGTTCTTGCTACCAAGCCTATATATAATTTCTACCGAAGTCCCGATATGGGAGAAGCTGCGGAGTTCGTGGTACATTTTTCTACTCCAGCCGAAAAGATCACACTCATCATAAACAGAATACACAGTTACATCGAAAGCAAGAAGGAGTTCTGGTATCCCTCACCTATGATAGTGTACAAGGACATGGATGCACTAAACGCGATAAAAATAGCAGTGTGGCCAAGTCACAGAATGAACCACCAAGACATGGGCGAAAGGTTTGTTAGAAGATCCCTTCTGATTGAAGAGATGGTCAAGATCTTCCGGGAGGTCGACATCCAGTTCCGGCTACTTCCTCTCGACGTCAGCATTCGAAGCACGCCCACCACCTCCGACCGCCTTCCTCCGAGTTGGGTCACCGCCACAACTCAGACTTGA 2874 0.4736 MDFSLRKSFKSYGSYKRSSGDNAEARHEEVPILYEQDQSSEHHLLQPHVAAMNSAGSPTYSGEVIVKIDDGDSKSSKAAASSSSQQGEAKLRRDPDFWKEGDMTVTKHEQSFDFQRPDPKPDDPPSKLIGNFLHRQQLSGDMSLDMDLEMDELQHDPYKTCLPPLDENATVSFSRELKVSFEEPHPNSAEEPAGDSVRRRYKDTPNMEEFPKPPQPPQSDRRAGSNQNIHSANSGDSEVVRCTSNASFERNLSLQRKSGLLRAKTKSRLIDPPDEPERKSGRIQKSGQIQKSGQIQKSGQIMSGLQSGNNKKGEEDEEDPFLEEDLPDDFKKTKFSIWVLLEWLSLILIVAALITTLCIPFLRGKNLWKLKLWKWEVMVLVLICGRLVSDWVIRIAVYFIERNFLLRKRVLYFVYGVKKAVQNCLWLGLVLIAWHSLFDKKVERETKNDFLEYVTKVLICFLVGTIVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEMQRQEEEEEKLAEEVMKLQNAGITIPPDLRASAFSSLKSPKVNRSGVLKSPHLKSGFSRPLSKKSDDGGIPIDYLHKLNPRNVSAWNMKRLMNIVRHGALSTLDEQIQGSAYEDEHTTQIRSENEAKAAAKKIFQNVTRRGYRFIYLEDLLRFMRDEEAVKTFSLFEGAPDTGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILIIWLLILEIATSKFLVVVSSQLVLAAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTVFLRYDNLKVTIPNSVLATKPIYNFYRSPDMGEAAEFVVHFSTPAEKITLIINRIHSYIESKKEFWYPSPMIVYKDMDALNAIKIAVWPSHRMNHQDMGERFVRRSLLIEEMVKIFREVDIQFRLLPLDVSIRSTPTTSDRLPPSWVTATTQT 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1852 957 MobiDBLite consensus disorder prediction 263 324 - -
Alju02g1852 957 Gene3D - 780 829 IPR023408 -
Alju02g1852 957 MobiDBLite consensus disorder prediction 267 284 - -
Alju02g1852 957 MobiDBLite consensus disorder prediction 176 240 - -
Alju02g1852 957 MobiDBLite consensus disorder prediction 51 135 - -
Alju02g1852 957 Pfam Mechanosensitive ion channel 722 927 IPR006685 GO:0016020|GO:0055085
Alju02g1852 957 FunFam Predicted mechanosensitive ion channel 780 829 - -
Alju02g1852 957 MobiDBLite consensus disorder prediction 178 207 - -
Alju02g1852 957 SUPERFAMILY Sm-like ribonucleoproteins 770 829 IPR010920 -
Alju02g1852 957 MobiDBLite consensus disorder prediction 285 309 - -
Alju02g1852 957 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 38 950 IPR016688 -
Alju02g1852 957 Coils Coil 509 532 - -
Alju02g1852 957 MobiDBLite consensus disorder prediction 219 240 - -
Alju02g1852 957 MobiDBLite consensus disorder prediction 89 123 - -
Alju02g1852 957 MobiDBLite consensus disorder prediction 1 30 - -
Alju02g1852 957 PIRSF Memb_At2g17000 50 957 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1852 Alju-ChrAlju02 17813232 17816915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1852 63 950 Mechanosensitive Ion Channel Family AT1G78610 55.315 0.0 915