Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1842 ATGGGCGACGTACAAGTACAACTGCCAGGCTTCCGATTTCACCCCACCGAAGAAGAACTCCTTGATTTCTACCTTAAGAAAATGATCACCGGCAACAAGCTCTGCCTTGACATCATCCACTTCCTCAATATCTACCTCCACGATCCCTGGGATTTGCCCGCCAAGGCCAACGTCGGCGAGCGAGAGTGGTACTTCTTCGTTCCCCGAGACAAGAAACACGGCAGCGGCGGCAGGCCCAACCGCACCACCCAGAAAGGCTTCTGGAAGGCCACCGGCTCCGACCGCAAGATCCACAGCCAATCCCACCCTAAGCGCCTCATCGGCCTCCGCAAGACCCTCGTCTTCTACCAGGGCCGAGCTCCCCGCGGCTGCAAGACCGATTGGGTCATGAATGAGTACCGCCTCCCTGACTCTTTCCACTTCCCCAACAAGGATGCCATAGTGTTGTGCAAGATATACCGGAAGGCTACGCCGTTGAAAGTGCTGGAGCAGAGGGCGTCGCTGTGTGAGTCTTCCTCGTCGTCCATGCCCACTACCTTCGAACCCAAGATGGAGAACGTGGAAGAGACGGTGGAAGTGGCGGCGGTGGCTAAGGTCAACCTGCCGGAGCTGCAATTACCCATGAACACGGGGTGGAGCCAAGACCCCTCTTGGCCTCAGTTAAACAGCCCTTGGCTCCAGTGTTTCACTCCCCTCACCATTTCCAACCTCTTAAATTGTTAA 723 0.5643 MGDVQVQLPGFRFHPTEEELLDFYLKKMITGNKLCLDIIHFLNIYLHDPWDLPAKANVGEREWYFFVPRDKKHGSGGRPNRTTQKGFWKATGSDRKIHSQSHPKRLIGLRKTLVFYQGRAPRGCKTDWVMNEYRLPDSFHFPNKDAIVLCKIYRKATPLKVLEQRASLCESSSSSMPTTFEPKMENVEETVEVAAVAKVNLPELQLPMNTGWSQDPSWPQLNSPWLQCFTPLTISNLLNC 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1842 240 MobiDBLite consensus disorder prediction 73 94 - -
Alju02g1842 240 SUPERFAMILY NAC domain 6 155 IPR036093 GO:0003677|GO:0006355
Alju02g1842 240 FunFam NAC domain-containing protein 67-like 16 159 - -
Alju02g1842 240 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 184 - -
Alju02g1842 240 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Alju02g1842 240 ProSiteProfiles NAC domain profile. 7 155 IPR003441 GO:0003677|GO:0006355
Alju02g1842 240 Gene3D NAC domain 16 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1842 Alju-ChrAlju02 17688628 17689594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1842 6 233 NAC Transcription Factor Family AT2G17040 53.818 5.32e-90 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g1842 NAM 1.4e-34 No_clan