Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1832 ATGGGCGGCTCAAAGGAAAACCAAAACTATCTGGGTTCGTTGATGCCTTCATCAAATCTTCAAGGCGGTTCAAGAATGGAGGGCGTCAAGCTTATGAAGGAGATGACACATAATAATCGTCGGGCTCTGAGCTATATCAATCAGAATATTATGGAGGCTACTCATAAGCCTTGTGTGGTCAACAGAACAGATCCATTCGGAAGATATACGACACAGACAGTTCAGCACTGCCCTGAAGAAACTAAAAAACTGAGCCTTTTGGCTCCGAACCCCAGTTACCATATGGACTGTACAATAACGGATATTGAAGAATACGAGGATGTTGGTGACAATGGAGTTCCAGAGTTTGTGAAGCACACAGAAGCAATGCTAGACGAAATTGACAGATTAGAGGAAGTGGAAATGGAAGACGTGGAGGAGCCTGTTATGGACATCGACGTCTGTGATGCGAAAGATCCACTAGCCGCTGTTGAATACATAGATGAGATCTACGAATTTTATAGGAGAATTGAGAATACCAGCTGTGTCTCTCCAGATTACATGGCTGGCCAGTTGGACGTCAATGAGAAGATGAGGGCTATCCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTATGGAGGAGACATTGTACCTTACCGTCAATCTCATAGACAGGTTCTTGGAGCGTCAGGCAGTGATCAGAAAGAAGCTTCAGTTGGTGGGTGTAACAGCCATGTTAATAGCTTGCAAATATGAGGAGGTTTCTGTCCCAACTGTTGAAGATTTTATCTTGATAACAGACAAGGCATACAAAAGGGAAGAAGTTCTAACTATGGAGAAGTTAATGATGAACACGTTACAATTCAACCTGTGTGCACCTACTCCATATGTATTCATGAGGAGGTTTCTTAAAGCAGCTCAATCTGACAAAAAGCTGGAACTCTTGTCGTTCTACATAATCGAGCTTTGCTTGGTGGAATACAAAATGCTCAAGTTTTCACCATCTTTGCTAGCTGCTGCTGCCATTTACACAGCTCAGTGTAGTCTGTACCAGTTTAAGCAGTGGACAAAGACCAGTGAATGGTATACTAACTACTCCGAAGACCAGCTTCTAAAGTGCTCAAGAATGATGGTTACTTTCCATCAGAAGGCAGGCACTGGAAAACTCACAGGAGTGTTTAGGAAGTACAGTGCGTGGAAGTATGGTTATGCCGCAAATATGAAACCAGCCCTGTTTTTGCAGGATTCTGATTGA 1245 0.4297 MGGSKENQNYLGSLMPSSNLQGGSRMEGVKLMKEMTHNNRRALSYINQNIMEATHKPCVVNRTDPFGRYTTQTVQHCPEETKKLSLLAPNPSYHMDCTITDIEEYEDVGDNGVPEFVKHTEAMLDEIDRLEEVEMEDVEEPVMDIDVCDAKDPLAAVEYIDEIYEFYRRIENTSCVSPDYMAGQLDVNEKMRAILIDWLIEVHYKFELMEETLYLTVNLIDRFLERQAVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYKREEVLTMEKLMMNTLQFNLCAPTPYVFMRRFLKAAQSDKKLELLSFYIIELCLVEYKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTNYSEDQLLKCSRMMVTFHQKAGTGKLTGVFRKYSAWKYGYAANMKPALFLQDSD 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1832 414 SMART Cyclin_C_2 290 407 IPR004367 -
Alju02g1832 414 PIRSF Cyclin_A_B_D_E 5 98 IPR046965 GO:0016538|GO:0044772
Alju02g1832 414 PIRSF Cyclin_A_B_D_E 27 414 IPR046965 GO:0016538|GO:0044772
Alju02g1832 414 Pfam Cyclin, C-terminal domain 290 405 IPR004367 -
Alju02g1832 414 CDD CYCLIN_AtCycB-like_rpt2 290 406 - -
Alju02g1832 414 PANTHER CYCLINS 126 385 IPR039361 -
Alju02g1832 414 SUPERFAMILY Cyclin-like 290 406 IPR036915 -
Alju02g1832 414 SMART cyclin_7 197 281 IPR013763 -
Alju02g1832 414 SMART cyclin_7 294 376 IPR013763 -
Alju02g1832 414 MobiDBLite consensus disorder prediction 1 24 - -
Alju02g1832 414 SUPERFAMILY Cyclin-like 151 288 IPR036915 -
Alju02g1832 414 Gene3D - 176 288 - -
Alju02g1832 414 Pfam Cyclin, N-terminal domain 162 288 IPR006671 -
Alju02g1832 414 ProSitePatterns Cyclins signature. 192 223 IPR006671 -
Alju02g1832 414 Gene3D - 162 402 - -
Alju02g1832 414 CDD CYCLIN_AtCycB-like_rpt1 143 285 - -
Alju02g1832 414 FunFam G2/mitotic-specific cyclin-1 278 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1832 Alju-ChrAlju02 17593073 17595487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1832 5 410 Core Cell Cycle Gene Families AT1G20610 57.541 7.63e-166 470