Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju02g1831 | ATGTCTCTCTCCGACGCTGGTGCCGTTCCTGCTCCGTCGTCGTTCACAACTCCGAGCAGCAGGATCGGCCAGAAGCAGCATTGTCGAAGCAAACGGAAGAAACGACTCGGCGTCATCATCGACCCCAAGGCTTCTTTCAAGCCCAAATACGCCAAACATCATCACCACCACCACCCTGATGCGGCGGCGGCGCCGATGACCCCCCGGCCATGCACCGAGTGCGGGAAGAAGTTCTGGTCATGGAAGGCTCTGTTCGGCCACATGCGCTGTCATCCTGAACGCCAGTGGCGCGGAATCAACCCGCCCCCAAATCTCCAACGACAACCAACACCACCGGAGAACCAAACACCGGCGGAATTACTGATGACCGCCGAAGACCACGAGATCGCGGCTGGCCTTTTGCTGCTGGCGAACTCGGAGGGGCCGGCGGTGGGAGGAGGAACGTCGTCGACCACGCGGTTCGAGTGCTCGAGTTGCAAGAAGGGGTTCAGTTCAAGGCAGGCTCTGGGAGGGCACAGGGCAAGCCACAAAAACGTGAAGGGGTGTTTCGCGAACGAAGAAGACGACGAGATCATGACGTCAGCGGCAATGATGGTTCTAGAAGGGCACAAGTGTGGGATATGCCTGAGGGTGTTTTCGAGTGGCCAAGCGCTGGGTGGTCACATGAGATGTCACTGGGATAAAGGTGACTCTGAACCCAACCTCTTTCATCATCATCAAGGATTTGGGCTTGACCTGAATTTGCCTCCACCTACGCTTCCACATGATTCATCTTCCTCCTCTCCTTTCACTCTGGATTTGAGGTTGGGACTCTAG | 816 | 0.5699 | MSLSDAGAVPAPSSFTTPSSRIGQKQHCRSKRKKRLGVIIDPKASFKPKYAKHHHHHHPDAAAAPMTPRPCTECGKKFWSWKALFGHMRCHPERQWRGINPPPNLQRQPTPPENQTPAELLMTAEDHEIAAGLLLLANSEGPAVGGGTSSTTRFECSSCKKGFSSRQALGGHRASHKNVKGCFANEEDDEIMTSAAMMVLEGHKCGICLRVFSSGQALGGHMRCHWDKGDSEPNLFHHHQGFGLDLNLPPPTLPHDSSSSSPFTLDLRLGL | 271 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju02g1831 | 271 | MobiDBLite | consensus disorder prediction | 247 | 271 | - | - | |
| Alju02g1831 | 271 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 156 | 176 | IPR013087 | - | |
| Alju02g1831 | 271 | SUPERFAMILY | beta-beta-alpha zinc fingers | 203 | 228 | IPR036236 | - | |
| Alju02g1831 | 271 | MobiDBLite | consensus disorder prediction | 7 | 24 | - | - | |
| Alju02g1831 | 271 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 69 | 96 | IPR013087 | - | |
| Alju02g1831 | 271 | Pfam | C2H2-type zinc finger | 203 | 228 | - | - | |
| Alju02g1831 | 271 | Pfam | C2H2-type zinc finger | 153 | 177 | - | - | |
| Alju02g1831 | 271 | Pfam | C2H2-type zinc finger | 70 | 93 | - | - | |
| Alju02g1831 | 271 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 154 | 181 | IPR013087 | - | |
| Alju02g1831 | 271 | SMART | c2h2final6 | 203 | 225 | IPR013087 | - | |
| Alju02g1831 | 271 | SMART | c2h2final6 | 69 | 91 | IPR013087 | - | |
| Alju02g1831 | 271 | SMART | c2h2final6 | 154 | 176 | IPR013087 | - | |
| Alju02g1831 | 271 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
| Alju02g1831 | 271 | SUPERFAMILY | beta-beta-alpha zinc fingers | 68 | 176 | IPR036236 | - | |
| Alju02g1831 | 271 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 203 | 225 | IPR013087 | - | |
| Alju02g1831 | 271 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 71 | 91 | IPR013087 | - | |
| Alju02g1831 | 271 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 205 | 225 | IPR013087 | - | |
| Alju02g1831 | 271 | MobiDBLite | consensus disorder prediction | 48 | 67 | - | - | |
| Alju02g1831 | 271 | Gene3D | Classic Zinc Finger | 151 | 225 | - | - | |
| Alju02g1831 | 271 | PANTHER | ZINC FINGER PROTEIN ZAT2-RELATED | 46 | 271 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju02g1831 | Alju-ChrAlju02 | 17587534 | 17588349 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju02g1831 | 30 | 271 | C2H2 Transcription Factor Family | AT4G35280 | 51.351 | 4.60e-74 | 226 |