Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1830 ATGGAGAGCGAGCGATCTACCTGCAGGAGTAGAGAGAATCTCAAGTTGAGGCATATAAGCAACATGGAATATGGAGCTGCCTTAGTACACAACAATTCAGCATTTGAGGCCATATCAGACAGTACTACTACTGCCTCAGTTTCAGAAGTAGTAGGGGATTTCATTGACGAGCTCTTAGCACATGGTTGCTGGCTGGAAACCACTACTGGAGGATCATACAACCCCACAAATCCCCCTTCTCTCATCAACAATGACCCTAATTTCCATAATTGTTGGACACCCTCCTCATCAGATCCAAATCACCACCACCAAATCTATCATCAACAAGATCAATCATCAGAGGCAAGTAATAATTTCCCATTATTATTCCAACCCGAAAGCTTTGTGGTTGCAAGCACTGAAGTCGGCAAAAGATGGTGGATCGGACCAAAGGCAAATCCTGGACCATCTTCTTCAGTCAAAGAAAGATTAGTCCTTGCCGTGGGATACCTAAGAGAATACACCAAAAATACCAACATGTTTCTTCAGATATGGGTGCCCACTAGGAGAGTTGATGATCCAAACTGTAATAAGGATCTTGAATGTTACCAAAATGTTTCCAAGGGTTGTTATCATCATTATCATCATCATCAGTTCGCTGCTGCCGAGGTGGAATCTGCTGCGGAAGAGTTTCGAGTAGTCCTAGGAAAGTTGCCAGATCATCATCATTATCAGTGGAATACCCCCACTAGTGTTCGGTTTTTCAAAAGTCATGAGTATGTTTCTTATGTAAATTATGCACCTCTGCACTACGATTTGCGTGGATCTTTGGCCCTTCCTGTGTTTGAGCGAGGCACTGGGACTTGCCTTGGCGTTGTTGAGATTGTAATGACCAATCACAACATCGATTATCACCCACAGATTGACAATGTCTGCCATTCTCTCCAGACTGTTGATTTTAACAAGAACACTAGCGAGAACCTTATTTCTCCGGCTGTGAAGGTGTTTGACGAGTTGTACCTAGCTGCACTAAATGAAATAGTAGAGGTATTAACATCTGTGTGCAAGACCCATAATTTGCCCTTAGCTCTCACTTGGTCGCCCTGTGCCCAACAAGGTAAGGCCGGATTATGTCCCAACGACAACTTCGTAGGTTGTTTGTCCACCGTGGATTCCGCCTGCTACGTGGCGGATTTAGAGTTGCTTGGGTTCCAGGAAGCCTGCTCAGAGTACCACCTCCTTAGAGGTCAAGGCATTGTTGGCACCGCCTTCACCACCACCAAACCATGCTTCGCCACCGACATAACCGCCTTCAGCAAAACCGAGTACCCTCTCTCTCACCACGCCGCCATGTTCGGGTTGCGCGCCGCCGTGGCTATTCCCCTTCGCAGTGTCTACACCGGAGCCGCCGCTGATTTCGTGCTGGAGTTTTTCTTACCCAAGAATTGCCATGACGGCGAAGAACAAAAGCAGTTGCTGAATTTGTTGTGCATTGTTGTGCAACAAGCTTGCCGGAGTTTCCATGTTGCCATGGACAACAAACAGATGGAGGAGGAAGAAGAAGGGTTCACGTTTACAGTTGGAGACATGTTGGCTGCTGCGGCGGCGGCTTCATCATCAAAAGGTGGTGGTGGTGGTGGGGCCCATCACACAGAAGAAACTCTAGAGTTTGGTGGGTCTAATTGTAATAATTTAGATGAAGCAGCGTCGTGTTCAAAAGAATCGTCGTGGATTGCTCATATGATGGAGGCTCAAACACAACACAAGGGTAAAGGCGTCTCGGTGGTGTCGTTGGAATACTTAGAAGAACCAAAACAAGAGTTTAAAGTGACAACCAACTGGGGATTCTGCAATAATAATAATAATGGCCAGACATTTTCAGATTATGGACAAGTTCATCATGCGAATTCAGCAGCAGCAGCAGCATCCAGAGCGATGAGTGTAGAGGGCGGAGGAGAATCTTATGCTTTTGGCGGTGGTGGCGGACGGCGATCGTCTTCCGGTGGCAGAAAATCAGGCGAGAAGAGACGAACCAAGGCCGAGAAGACTATCAGCTTGCCGGTTCTCCGGCAATACTTTGCAGGAAGTCTTAAAGATGCTGCCAAGAGTATCGGCGTGTGTCCGACAACTCTGAAAAGGATATGCAGACAACATGGGATTACAAGGTGGCCTTCGAGGAAAATAAAGAAGGTAGGACACTCATTAAGGAAACTTCAGCTTGTGATCGATTCAGTACAAGGTGCTGATGGAGCCATTCAGATCGGTTCTTTCTACTCCAGTTTCCCAGAATTGAGCTCCACAAAATTGTCTTCTGGCACTAATCCTTCTCAATCATCAAGCATCAGTGACCATTCTAAGAAACTACATAATAATAATGCTCATCGTCCCGAGCACGGCTTATATAGCCACCACCACGGCGGCGGCGCGACAACATTAAAATCTCCGCCCTCTTGTTGCAGCCAGACTTCCACCATCATCAACGCCGCCGTGTCTAGTGGTGGTGGAGATGTTTTAATGGCAGAAAACCCTGAAGCGTCGCTCAAGCTGAGAGCTCATGAGCAGAAACTATCATCACTTAGTGAGCATCCTAGCACTGTTGAGGTTTTACCTCCGCCGCCGTTGCCGGAAAACAGTGGTGGGTGGAACAATGGACGAGACGGTGGTGCTTTTAGGGTGAAAGCTACATTTGGGGATGAGAAGATTCGTTTTAGCTTGCAACCAAATTGGCGGTTTAGAGAACTAAAAATGGAGATAGCAAGAAGATTCAATGTAGATGATTTGAGCAACATTGGTGTGAAGTATTTAGATGAGGAAGGTGAGTGGGTTCTTTTAACATGTGATGCTGATCTTGAGGAATCTAAAGACACATATCGATCATCAAAGAGCCGTACAATGAGGTTCGCTCTGTTTCAAGCTTCGCCTCTAAATCTAGCCACCAACACTTTTGGCAGCAACAGCTCGTCATGA 2946 0.4657 MESERSTCRSRENLKLRHISNMEYGAALVHNNSAFEAISDSTTTASVSEVVGDFIDELLAHGCWLETTTGGSYNPTNPPSLINNDPNFHNCWTPSSSDPNHHHQIYHQQDQSSEASNNFPLLFQPESFVVASTEVGKRWWIGPKANPGPSSSVKERLVLAVGYLREYTKNTNMFLQIWVPTRRVDDPNCNKDLECYQNVSKGCYHHYHHHQFAAAEVESAAEEFRVVLGKLPDHHHYQWNTPTSVRFFKSHEYVSYVNYAPLHYDLRGSLALPVFERGTGTCLGVVEIVMTNHNIDYHPQIDNVCHSLQTVDFNKNTSENLISPAVKVFDELYLAALNEIVEVLTSVCKTHNLPLALTWSPCAQQGKAGLCPNDNFVGCLSTVDSACYVADLELLGFQEACSEYHLLRGQGIVGTAFTTTKPCFATDITAFSKTEYPLSHHAAMFGLRAAVAIPLRSVYTGAAADFVLEFFLPKNCHDGEEQKQLLNLLCIVVQQACRSFHVAMDNKQMEEEEEGFTFTVGDMLAAAAAASSSKGGGGGGAHHTEETLEFGGSNCNNLDEAASCSKESSWIAHMMEAQTQHKGKGVSVVSLEYLEEPKQEFKVTTNWGFCNNNNNGQTFSDYGQVHHANSAAAAASRAMSVEGGGESYAFGGGGGRRSSSGGRKSGEKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLRKLQLVIDSVQGADGAIQIGSFYSSFPELSSTKLSSGTNPSQSSSISDHSKKLHNNNAHRPEHGLYSHHHGGGATTLKSPPSCCSQTSTIINAAVSSGGGDVLMAENPEASLKLRAHEQKLSSLSEHPSTVEVLPPPPLPENSGGWNNGRDGGAFRVKATFGDEKIRFSLQPNWRFRELKMEIARRFNVDDLSNIGVKYLDEEGEWVLLTCDADLEESKDTYRSSKSRTMRFALFQASPLNLATNTFGSNSSS 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1830 981 PANTHER PROTEIN NLP8 100 973 IPR045012 GO:0003700
Alju02g1830 981 SMART PB1_new 882 965 IPR000270 GO:0005515
Alju02g1830 981 Gene3D - 881 967 - -
Alju02g1830 981 MobiDBLite consensus disorder prediction 780 795 - -
Alju02g1830 981 MobiDBLite consensus disorder prediction 761 779 - -
Alju02g1830 981 Pfam PB1 domain 883 964 IPR000270 GO:0005515
Alju02g1830 981 SUPERFAMILY CAD & PB1 domains 878 967 - -
Alju02g1830 981 Pfam RWP-RK domain 677 724 IPR003035 -
Alju02g1830 981 CDD PB1_NLP 883 964 IPR034891 -
Alju02g1830 981 MobiDBLite consensus disorder prediction 853 877 - -
Alju02g1830 981 MobiDBLite consensus disorder prediction 647 674 - -
Alju02g1830 981 ProSiteProfiles RWP-RK domain profile. 663 744 IPR003035 -
Alju02g1830 981 ProSiteProfiles PB1 domain profile. 882 965 IPR000270 GO:0005515
Alju02g1830 981 MobiDBLite consensus disorder prediction 761 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1830 Alju-ChrAlju02 17567471 17572535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1830 32 977 NLP Transcription Factor Family AT4G35270 42.633 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Alju02g1830 PB1 2e-17 CL0072