Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1807 ATGAACATGGGAGATTCAACGAAGAAATCGTATAAGAAGGTCTGTACTGGAGAAACTGAACCTGAAGACGACGACGACGGCGAGGAGGAAGAAGAGGGGTGGGTCACGGTGGAGCAAACGGCGAGAGGTCCGAACGTGATAGTGTCATCAGAGACAATGAAAGCCAAACTGGCCAAGAGGCACAATGCCGATCATTGCCGATTGAAATCGGCTGCGCCGGTGACAGAGGGGATGACGGAGACGCCTAGGATGAGTGAGGATAATCTCGGGGAAAGATCTGATCTGCATGTGGACGATCTGGTGGAGAAGCAGGAGGAAAATACTGAATTTACAAAGGTTAATAATAATTTGTGTCTAAATAAGAATTATAAAGAGGTACGGGGCATTAGTAAGAATAAAGGAAATGAGGCCGGGGAAGAAATGTTACGGGTTGAAGTAAGATCATTGATGTCACAATTGCCTGAACTGCCGCCAATGCCACCACTTGACCCTCCGAATTTTTGCCCTATGGTGTTTGATGTTTGCAAGGTATGTGGACTGTGTTGTGATTGTTTGATGAATAGTGGTGCTGCAATAGTTGGTGTTGATTTCCAAATTTATGAACTCTTTCGAATCTCCAAAATGCTTCATCAGCCCCATACTTCCCTCGCTCCTTATAAAGTACTCTTATCTCTGCCTCAACCATCACTTGCCTCTTTGCTGTTTTCCAACCCTTCTGCTGTCACTGGCAGCACGACTGATTCTCCGGACGTTCCTTCAAATTGTCAAAATTTGATCGCCTATCAGGCTGTCGAAACTTCTCAAGGGACTTCCGACGTGCCCACAACTTTTCGTAATCCGTGGAGGGACGGTTCTGTGCGTCAAACTAACCGAACGAAAATTAAAAACCCAGTGCGATGTGAGGTTTGCAAAATTGATTTTAATAGCAAGAGTGTGTTTGAGGACCACATATCAGGGAAGAAGCACAAGAAGAAAATGCAATTGCACAATAATCCCAGCAACACGATATTATCTGGAACCTCTAATGTGAAGAATGTTCAAGTCCAAGACAGTAGTGTCCAAGGAAAAGAGCCATTTGTTGATTCAGGCAAGGATTTAAAGTCCAAGAAACGGAAGCTTTTGAGTGGGGGTGAAGCAGAGCATGATGATCAGGTTGACTTGACATCTAATAATGATGGGATTGGTTCGAAGAAAGTCAAGGTTACTCAATGTACACGATGTGAAATTTGCATGATCAATTGTAATACTAAGGATATTTATATCACACACTTGTCTGGGAAGAAACACCTGAGGAACCTGAAAAAACTATCTAAATTAGAAAGTGATGGCGCTGATGTCAGTGTAGCTAGTATCGCTGCAGCCATTGTAACAGAAAATGATAAGCAACCGGCATCGAATCCAGCAGCTATTGGGTCACAAGAAAAGCCAGGCCCTAGTGAACAAGAATGTATCAATTCATGTCAACCAGAAAATGCAGTCATATTAGAAGCTCAAGAAAAGGACACTGAAACAGAGAAACAGTCTAAATCAAAAGGGGCCGGCACCGGTGCTGATGTCAGCATACCTGGCATGACTGCAGCCATCATAGCAGCAAATAATAAGCAACCAGCGACAAATCCAGCTATTGAGTCACAAGAAAAGCCTGGCACTAATAAACAAGAATGTGTCAATTCATGTCAACCAGAAAATGCAGTCATATTAGAAGCTCCAGAAAAGGACACTGAATCAAAGAAACGGAAGCATGAACTTGATGGTGGGACTTCTATAACCTCTACCAAGTTTTGCACTCTATCTAATGTCAACAATGAGACAGTCTTTAATTTGCCTGATTGCCCTGCTCGGTGTGAAATCTGCATGATTGATTGTAATAGTAAGCCTGCTTATGTCAGACATATATCAGGGAAGAGACACAAGAGGAACCTGGAGAAAGTATCAAAATCAAAAACCAATGGAGCTGGTGCTAGCGTAGCTGATGATGTTGCAGCCATTATGACGGCAATTGATCTGCAACAAGCAACAGATCAAGCAATTGGGCCACAAGAAAAGCTGGAGACTAGTCCACAAGAAGGGGTGGATGCACTTAAATCAGGAAGTGTAGTCATGTTGGATGCTCCAGCCGAGGACGCTGAAACAAAGAAACAGAAGCATCAACTTGAAGGTGGGACTTCTATAGCCTCTACCAAGTCTTGCACTCTATCTCATGCCAAGAATGAGACAGTCTTTAATTTGCCTAATTGCCCTGCTCGGTGTGAAATCTGCATGATTAATTGTAATAGTAAGCCTGTTTATATCACACATATATCAGGGAAGAGACACAAGAGGAACCTGGAGAAAGTATTGAAATCAAAAAATGATGAGGCTGGTGCTAGTGTAGCCGAGGCTGTTTCAGCCATTATGCCTGGAATTGATGCGCAACAAGCAACGAATCAAGCAATTGAGCCACAAGAAAAGCTGGAGACTAGTCCACAAGAAGGGGTGGATGCCCTTAAATCAGGAAGTGTAGTCGTGTTGGAGGCTTCGGAAAAGGATATGGAGACAGAGAGACGTAAAATTGAACCTTTTGATGGGGCTGCAACTACTTCTTTCAGAGTGTGCAAGCTGTGCAATGCGCCGTGCAACAGCGAAGCAGCCTTTAATTCTCACCTCCATGGGAAGAAACATGCTGCAATGGTGAAGAAGCTGGCAAATTCAAAGAGTAGTTGAAACCTAAGTAGAGGGGTGATATTTCTGGTACGTTCCTAG 2742 0.4362 MNMGDSTKKSYKKVCTGETEPEDDDDGEEEEEGWVTVEQTARGPNVIVSSETMKAKLAKRHNADHCRLKSAAPVTEGMTETPRMSEDNLGERSDLHVDDLVEKQEENTEFTKVNNNLCLNKNYKEVRGISKNKGNEAGEEMLRVEVRSLMSQLPELPPMPPLDPPNFCPMVFDVCKVCGLCCDCLMNSGAAIVGVDFQIYELFRISKMLHQPHTSLAPYKVLLSLPQPSLASLLFSNPSAVTGSTTDSPDVPSNCQNLIAYQAVETSQGTSDVPTTFRNPWRDGSVRQTNRTKIKNPVRCEVCKIDFNSKSVFEDHISGKKHKKKMQLHNNPSNTILSGTSNVKNVQVQDSSVQGKEPFVDSGKDLKSKKRKLLSGGEAEHDDQVDLTSNNDGIGSKKVKVTQCTRCEICMINCNTKDIYITHLSGKKHLRNLKKLSKLESDGADVSVASIAAAIVTENDKQPASNPAAIGSQEKPGPSEQECINSCQPENAVILEAQEKDTETEKQSKSKGAGTGADVSIPGMTAAIIAANNKQPATNPAIESQEKPGTNKQECVNSCQPENAVILEAPEKDTESKKRKHELDGGTSITSTKFCTLSNVNNETVFNLPDCPARCEICMIDCNSKPAYVRHISGKRHKRNLEKVSKSKTNGAGASVADDVAAIMTAIDLQQATDQAIGPQEKLETSPQEGVDALKSGSVVMLDAPAEDAETKKQKHQLEGGTSIASTKSCTLSHAKNETVFNLPNCPARCEICMINCNSKPVYITHISGKRHKRNLEKVLKSKNDEAGASVAEAVSAIMPGIDAQQATNQAIEPQEKLETSPQEGVDALKSGSVVVLEASEKDMETERRKIEPFDGAATTSFRVCKLCNAPCNSEAAFNSHLHGKKHAAMVKKLANSKSSXNLSRGVIFLVRS 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1807 913 SUPERFAMILY beta-beta-alpha zinc fingers 396 436 IPR036236 -
Alju02g1807 913 ProSitePatterns Zinc finger C2H2 type domain signature. 300 322 IPR013087 -
Alju02g1807 913 Gene3D Classic Zinc Finger 283 331 - -
Alju02g1807 913 Gene3D Classic Zinc Finger 598 644 - -
Alju02g1807 913 Gene3D Classic Zinc Finger 733 779 - -
Alju02g1807 913 SUPERFAMILY beta-beta-alpha zinc fingers 745 779 IPR036236 -
Alju02g1807 913 PANTHER ZINC FINGER PROTEIN 385B-LIKE 750 898 - -
Alju02g1807 913 SMART c2h2final6 298 322 IPR013087 -
Alju02g1807 913 SMART c2h2final6 863 887 IPR013087 -
Alju02g1807 913 SMART c2h2final6 613 637 IPR013087 -
Alju02g1807 913 SMART c2h2final6 748 772 IPR013087 -
Alju02g1807 913 SMART c2h2final6 405 429 IPR013087 -
Alju02g1807 913 MobiDBLite consensus disorder prediction 462 519 - -
Alju02g1807 913 SUPERFAMILY beta-beta-alpha zinc fingers 860 894 IPR036236 -
Alju02g1807 913 SMART ZnF_U1_5 860 894 IPR003604 GO:0003676|GO:0008270
Alju02g1807 913 SMART ZnF_U1_5 745 779 IPR003604 GO:0003676|GO:0008270
Alju02g1807 913 SMART ZnF_U1_5 610 644 IPR003604 GO:0003676|GO:0008270
Alju02g1807 913 SMART ZnF_U1_5 295 329 IPR003604 GO:0003676|GO:0008270
Alju02g1807 913 SMART ZnF_U1_5 402 436 IPR003604 GO:0003676|GO:0008270
Alju02g1807 913 Gene3D Classic Zinc Finger 857 899 - -
Alju02g1807 913 Gene3D Classic Zinc Finger 395 445 - -
Alju02g1807 913 MobiDBLite consensus disorder prediction 1 43 - -
Alju02g1807 913 SUPERFAMILY beta-beta-alpha zinc fingers 286 329 IPR036236 -
Alju02g1807 913 MobiDBLite consensus disorder prediction 20 34 - -
Alju02g1807 913 MobiDBLite consensus disorder prediction 478 492 - -
Alju02g1807 913 Pfam Zinc-finger of C2H2 type 299 322 - -
Alju02g1807 913 Pfam Zinc-finger of C2H2 type 865 887 - -
Alju02g1807 913 Pfam Zinc-finger of C2H2 type 406 429 - -
Alju02g1807 913 Pfam Zinc-finger of C2H2 type 615 637 - -
Alju02g1807 913 Pfam Zinc-finger of C2H2 type 750 772 - -
Alju02g1807 913 SUPERFAMILY beta-beta-alpha zinc fingers 609 644 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1807 Alju-ChrAlju02 17381504 17391204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1807 747 891 C2H2 Transcription Factor Family AT5G61190 29.452 2.30e-06 49.7