Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1801 ATGTTACGGCCAAGGGATCGGCCGGCACAAGATTCAAATGCTTCTAATTCTGCAGCCACCAATCTGCGACGCTCAACTAGGAAGAGAAGGATTTCTGTAAATCTTGAAGGTTTCACTGACAGTTCTGGAGCTGAGGATGAAGACTTGATGAGGCCCACATATCAACAACCGAGAAAGCAGATTGACCAAGGTGTTAGTCATGATGAGTTGAGGTCTCGCAAACACAAAAAAACTGTGGAAACTAAATCAAACCCTCGGCGTGAAGGTCTGCGGCCTCGTCGTTCAAAGGCTGTTGTAAGAGAACCCTTAAATTCAGAATCTGATGATGAACAAGGTTTTTCAGAAGAAAAGGTTGGACAGGATGAAACAGAAAATGGGAATGATTTGGAGGAACAGGATGCAGATGATGATCAGAATGAGATTGAAGGAGATGCTGAGGCTGAAGATGAAGGTGATGATGAGGAAGAGGATGAAGGAGATGAAGATGGTGATGATGAAGATGGTGAAGAAGAGCAGGATGGAAGAAGACGCTATGATCTTCGAAACCGTGCAGATGTTCGCAGATTCTCGATGGAAGAAGGGAAAGCCCAACCAAGGTCACCCCGAAGAGTGTTACATCAAGGTATGGGCACTAAGGTTGGCAGGGATGTCAGGAAAGGTGGATCAAGAGTTCATAAGCGTTATCGTTTAGCAAGACCTGAAGATTCTGATGACTCCATTCTTGTGGATGAACTGGATCAAGGCCCTGCTATTCCATGGGGTCGAGGTGGCAGCAGGTCTGGCCCACCTTGGCTTTTTGGTGGACTAGACACACATGGAACAACAGCATGGGGATTGAATCTTGCTGCATCAGGTTGGGGTCATCAAGGTGATGCTTTAGCTACATTGACTTCTGGGATTCAATCTGCTGGACCAAGCTCAAAAGGGGGCGCAGATATTCAACCATTACAGGTTGATGACAGTGTTAGTTTTGATGACATAGGTGGGCTTTCTGAATATATTGATGCTCTGAAGGAAATGATTTTCTTTCCGTTACTGTATCCAGATTTCTTTGCAAGTTATCATATTACTCCACCTAGAGGGGTGTTGTTATGTGGGCCCCCTGGCACAGGGAAAACACTAATTGCGAGAGCTTTAGCTTGTGCTGCATCAAAAGCTGGTCAGAAGGTTAGCTTTTACATGCGCAAAGGAGCAGATGTACTAAGCAAGTGGGTTGGTGAGGCTGAAAGACAATTGAAATTACTCTTTGAGGAAGCACAAAAGAATCAACCTTCAATTATTTTCTTTGATGAAATAGATGGGCTTGCTCCTGTGAGGTCTAGCAAGCAAGAACAGATTCACAATTCTATTGTGTCCACTTTACTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATAGGGGCCACCAATAGGATTGATGCTATTGATGGGGCCTTGCGCCGCCCTGGTAGATTTGACCGTGAATTCAACTTTCCCTTGCCTGGTTGTGAGGCACGTGCTGAAATATTGGACATTCATACCCGTAAGTGGAAGCATCCTCCTTCAAAGGAACTGAAAATGGAGCTTGCTGCTAGTTGTGTAGGATATTGTGGTGCTGACCTAAAGGCTCTCTGTACTGAAGCTGCCATTCGTGCTTTTCGTGAAAAATATCCACAGGTTTATATGAGTGATGACAAATTCTTAATAGATGTTGATTCTGTCAGGGTAGAAAAGTATCACTTTGTTGAAGCAATGTCAACAATAACTCCTGCTGCTCATAGGGGTGCAATTGTACACTCTAGGCCATTGTCTCTAGTTGTTCAACCATGCCTACAAAGACATCTAGAGGAAGCCATGAAAATTATATCTGATATTTTTCCTCCAGTTGTTGTTGCATCAGAATTGTCCAAACTTTCTATGCTTTCCTATGGTTCTGCTATTCCACTTGTCTATAGACCTAGGCTTCTACTTTGTGGTGGTGAAGGTACCGGGCTGGATCATCTTGGGCCTGCAGTTTTACACGAACTGGAAAAATTTCCTGTTCATTCATTAGGACTTCCATCTCTCTTGTCGGATCCTAGTGCTAAGATGCCAGAGGAGGCTTTAGTACATATATTTAGTGAAGCTAGAAGAACAACCCCATCTATTCTCTATTTACCACAATTCAACGTTTGGTGGGAAACAGCACATGAACAGCTCAGGGCTGTTCTCCTGACTTTGCTTGAAGAATTGCCTTCTGACATCCCTATTTTATTACTTGGAACATCATCAGTGCCGCTTGATGAAGTTGATGAAGTGCCTCCTCCGTTGTTTCCTTCTCGTTCAGTCTATAACATGAACTTACCATCTACTGAAGATAGAACATCATTTTTCAATTGTTTGATCGATGCTGCTTTATCAGTCTCATTGGAGAGAACAGGCAAAAAATCCCAAGAAACAGATTCTCTTCCTGAACTTCCCAAGGCACCAAAATTAGCAGGTGGTATGAAGGTATCTGAGCTCAAAGCAACGGTTGAAGCTGAGCAGCATGCCCTTCGCAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATATTATATGACAAGCGATTTATTGCCTTCCATTGTCCGGTATCAGATGAAGATGCACCTAACTATCGCTCAATAATTCAGAACCCGATGGACATGGCTACCATACTGCAGCATGTTGATAATGGTCACTATATTACATGTTCAGCATTCTTACAGGACATTGATCTTATTGTTTCCAATGCTAAGGCTTATAATGGAGAGGACTACAATGGTTCAAGGATTGTCAGTAGAGCTTGTGAACTCCGTGATGCAGTGCATGGGATGCTCTCACAGATGGACCCAGCCCTGGTTGCATACTGTGACAAGATTGCTGCCCAAGGTGGCCCGGTTAATTTGCCGGATGAATTCAGTGGTTCTACTTTCCCATCTACTCCTGTTGTTCAGCTGGGAACCAGCACTAGAACGAGTGCTCGGCTTCGTAATGTCCAACCTGAGGTTAATATGGATCAAAGCTATGAAGTATTGAAGCGGCCGAAAAGGAGCACTGATTTCACACACGCAGATGACAAGTCACGGCAAGATCCTCTGCCCCCGAAGACTTTACCAGAACAGCAAGCCAATGAAGTGGCTTGTGAAGGGCCAGAACCTGCTTCAGCTGATGAAAATCTACATGGAGCTAGTACATGCGAACAAGCGGATGATAGTAGCGGCGTAGATGTCACTATGTCTGATGCTGAGTTTGCCAGCCAAGTGGAGTCTGTGAAGCAGCTTTTTGTGAAGCGTAGTGGAAACTACAACATCCCGCAGCTTGAAAGGATTTACACAAGAATCATGAAGGGTATTTTTGAAGCCGAAGGCAAAGGAACGAAAAATCTCAAGACTTGGGTATTGAAGTTTTTGTTTACATTTGTAGAAGATGACGCAAATTTCTAA 3438 0.4401 MLRPRDRPAQDSNASNSAATNLRRSTRKRRISVNLEGFTDSSGAEDEDLMRPTYQQPRKQIDQGVSHDELRSRKHKKTVETKSNPRREGLRPRRSKAVVREPLNSESDDEQGFSEEKVGQDETENGNDLEEQDADDDQNEIEGDAEAEDEGDDEEEDEGDEDGDDEDGEEEQDGRRRYDLRNRADVRRFSMEEGKAQPRSPRRVLHQGMGTKVGRDVRKGGSRVHKRYRLARPEDSDDSILVDELDQGPAIPWGRGGSRSGPPWLFGGLDTHGTTAWGLNLAASGWGHQGDALATLTSGIQSAGPSSKGGADIQPLQVDDSVSFDDIGGLSEYIDALKEMIFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSKELKMELAASCVGYCGADLKALCTEAAIRAFREKYPQVYMSDDKFLIDVDSVRVEKYHFVEAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLEEAMKIISDIFPPVVVASELSKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKMPEEALVHIFSEARRTTPSILYLPQFNVWWETAHEQLRAVLLTLLEELPSDIPILLLGTSSVPLDEVDEVPPPLFPSRSVYNMNLPSTEDRTSFFNCLIDAALSVSLERTGKKSQETDSLPELPKAPKLAGGMKVSELKATVEAEQHALRRLRMCLRDVCNRILYDKRFIAFHCPVSDEDAPNYRSIIQNPMDMATILQHVDNGHYITCSAFLQDIDLIVSNAKAYNGEDYNGSRIVSRACELRDAVHGMLSQMDPALVAYCDKIAAQGGPVNLPDEFSGSTFPSTPVVQLGTSTRTSARLRNVQPEVNMDQSYEVLKRPKRSTDFTHADDKSRQDPLPPKTLPEQQANEVACEGPEPASADENLHGASTCEQADDSSGVDVTMSDAEFASQVESVKQLFVKRSGNYNIPQLERIYTRIMKGIFEAEGKGTKNLKTWVLKFLFTFVEDDANF 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1801 1145 MobiDBLite consensus disorder prediction 1007 1031 - -
Alju02g1801 1145 FunFam ATPase family AAA domain-containing protein 834 962 - -
Alju02g1801 1145 Pfam AAA+ lid domain 525 561 IPR041569 -
Alju02g1801 1145 MobiDBLite consensus disorder prediction 971 1003 - -
Alju02g1801 1145 FunFam ATPase family, AAA domain-containing 2 320 503 - -
Alju02g1801 1145 SMART bromo_6 842 949 IPR001487 GO:0005515
Alju02g1801 1145 Pfam ATPase family associated with various cellular activities (AAA) 362 497 IPR003959 GO:0005524|GO:0016887
Alju02g1801 1145 MobiDBLite consensus disorder prediction 1 181 - -
Alju02g1801 1145 PRINTS Bromodomain signature 908 927 IPR001487 GO:0005515
Alju02g1801 1145 PRINTS Bromodomain signature 874 890 IPR001487 GO:0005515
Alju02g1801 1145 PRINTS Bromodomain signature 890 908 IPR001487 GO:0005515
Alju02g1801 1145 MobiDBLite consensus disorder prediction 125 169 - -
Alju02g1801 1145 MobiDBLite consensus disorder prediction 970 1057 - -
Alju02g1801 1145 CDD Bromo_AAA 842 952 - -
Alju02g1801 1145 Gene3D - 834 962 IPR036427 GO:0005515
Alju02g1801 1145 MobiDBLite consensus disorder prediction 62 124 - -
Alju02g1801 1145 ProSiteProfiles Bromodomain profile. 865 927 IPR001487 GO:0005515
Alju02g1801 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 321 583 IPR027417 -
Alju02g1801 1145 PANTHER AAA DOMAIN-CONTAINING 11 959 IPR045199 -
Alju02g1801 1145 FunFam ATPase family AAA domain-containing protein 2B 498 583 - -
Alju02g1801 1145 Pfam Bromodomain 856 923 IPR001487 GO:0005515
Alju02g1801 1145 Gene3D - 498 583 - -
Alju02g1801 1145 ProSitePatterns AAA-protein family signature. 467 485 IPR003960 GO:0005524|GO:0016887
Alju02g1801 1145 Gene3D - 629 794 IPR027417 -
Alju02g1801 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 646 795 IPR027417 -
Alju02g1801 1145 SUPERFAMILY Bromodomain 841 954 IPR036427 GO:0005515
Alju02g1801 1145 SMART AAA_5 358 499 IPR003593 GO:0016887
Alju02g1801 1145 Gene3D - 320 590 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1801 Alju-ChrAlju02 17315647 17322535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1801 308 562 Calmodulin-binding Proteins AT3G56690 37.066 2.95e-41 163