Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1789 ATGATTTCCGTTGAATCGCAGCAAAAACCAGACCTCTCTGATCCTTCTCCAAAACCTGCTTCAAATGAAGCAAAATCTGCAGATTCTGCCCAAACTACCCATATTTTCAGGTCTAAATTACCGGACATACCTATTTCGAACCATCTTCCTCTTCACACTTACTGCTTCGAGAATCTCGCCCAATTCACTGATCGTCCCTGCCTCATCGTCGGCTCCACCGGAAAAATTTACTCCTACGCGGAAGCTCACCTGCAGTCGCGGAAGATCGCAGCCGGATTCTCCAAGCTTGGGGTCAAGAAAGGCGATGTGATTATGATTTTGCTTCAGAATTCTGCTGAATTTGTTTTGTCGTTCTTTGCTGCTTCAATGATCGGCGCTGTGGCCACCACGGCGAATCCGTTCTACACTGCAGACGAAATCTTCAAGCAGTTCCATGCCGCGAAGGCCAAACTGATCATCACGCAATCCGCGTACGTCGGAAAGCTCCGGGATCATGAGGCCGGCAAGGACATCGGAGAGGATCAGCTTAAGGTGATTACCGTCGATGATCCGCCGGAGAAGTGCCTGCATTTCTCGGTGGTGTCGGAAGCCGATGAGAACGAGTTGCCGGAGCTGGGGTTCGACCCGGACGATCCAGTGGCGCTACCGTTTTCCTCCGGAACGACAGGGTTGCCGAAGGGCGTGATTCTGACTCACAAGAGCTTAACAACGAGCGTGGCTCAACAGGTGGACGGCGAGAATCCGAACCTGAACCTGAAACCAGAGGACGTGGTGCTCTGTGTGCTTCCCCTGTTTCACATATTCTCTCTGAACAGTGTGTTGTTGTGTGCTCTGAGGGCGGGAAGTGCGGTGTTGCTGATGCATAAGTTTGAAATTGGCGCGTTGCTGGAACTGACGCAGAAGCATAAGGTGTCGGTGGCGATGGTGGTGCCGCCTCTGGTGCTGGCGTTGGCGAAGAATCCGATGGTGGCGGACTACGACCTGAGCTCGATTCGGTTGGTGTTGTCCGGGGCGGCGCCGCTGGGGAAGGAACTGGAGGACGCTCTTAGAAGCAGAGTGCCTCAGGCCGTTTTGGGTCAGGGGTACGGAATGACGGAGGCGGGGCCAGTGTTGTCAATGTGCCTGGGATTTGCAAGAGAAGCATTCACCACAAAGTCAGGGTCATGTGGCACAGTGGTAAGAAACGCAGAGCTCAAAGTGCTGGACCCTGAAACTGGTCTCTCTCTTGGCTATAACCAGCCTGGTGAGATTTGCATCCGAGGCCACCAAATCATGAAAGGATATCTGAATAATGAGGAGGCCACAGCAACAACAATAGATGCAGAGGGATGGCTGCACACTGGCGATATTGGCTACGTGGATGACGACGACGAGTTATTCATTGTGGACCGAGTTAAGGAGCTCATCAAATTCAAAGGCTTCCAGGTGCCACCAGCAGAACTTGAAGGCCTTCTCGTAAGTCACCCTTCCATTGCAGATTCAGCTGTCGTCCCGCAAAAGGATGAGGTTGCTGGTGAAGTTCCTGTTGCTTTTGTGGTGAGGTCAAATGGCTTTGATCTTACGGAAGAGGCTGTAAAGGAATTCATCGCTAAACGGGTAGTGTTTTACAAAAGATTACACAGAGTGTACTTCGTTCATGCAATTCCAAAGTCTCCAGCTGGCAAGATTTTGAGAAAAGATCTGCGAGGAAAGCTGGAGAGCAACAATATCCAAACGCCTTGA 1722 0.5157 MISVESQQKPDLSDPSPKPASNEAKSADSAQTTHIFRSKLPDIPISNHLPLHTYCFENLAQFTDRPCLIVGSTGKIYSYAEAHLQSRKIAAGFSKLGVKKGDVIMILLQNSAEFVLSFFAASMIGAVATTANPFYTADEIFKQFHAAKAKLIITQSAYVGKLRDHEAGKDIGEDQLKVITVDDPPEKCLHFSVVSEADENELPELGFDPDDPVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLNLKPEDVVLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGALLELTQKHKVSVAMVVPPLVLALAKNPMVADYDLSSIRLVLSGAAPLGKELEDALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAREAFTTKSGSCGTVVRNAELKVLDPETGLSLGYNQPGEICIRGHQIMKGYLNNEEATATTIDAEGWLHTGDIGYVDDDDELFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADSAVVPQKDEVAGEVPVAFVVRSNGFDLTEEAVKEFIAKRVVFYKRLHRVYFVHAIPKSPAGKILRKDLRGKLESNNIQTP 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1789 573 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 31 562 - -
Alju02g1789 573 Pfam AMP-binding enzyme 57 471 IPR000873 -
Alju02g1789 573 Gene3D - 26 465 IPR042099 -
Alju02g1789 573 CDD 4CL 45 561 - -
Alju02g1789 573 SUPERFAMILY Acetyl-CoA synthetase-like 33 566 - -
Alju02g1789 573 Pfam AMP-binding enzyme C-terminal domain 480 555 IPR025110 -
Alju02g1789 573 ProSitePatterns Putative AMP-binding domain signature. 215 226 IPR020845 -
Alju02g1789 573 Gene3D - 466 569 IPR045851 -
Alju02g1789 573 FunFam 4-coumarate--CoA ligase 2 467 568 - -
Alju02g1789 573 FunFam Long-chain-fatty-acid--CoA ligase FadD 37 466 - -
Alju02g1789 573 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1789 Alju-ChrAlju02 17138571 17143711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1789 8 478 Monolignol Biosynthesis Gene Families AT1G65060 68.776 0.0 655