Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1782 ATGGGACGTTCGCCTTGCTGCGAGAAAGCCCACACAAACAAAGGTGCTTGGACCAAAGAGGAAGACCAACGCCTTATCGATTATATTCGCCTCCATGGCGAAGGCTCTTGGCGTTCTCTCCCTAAAGCTGCTGGATTGCTCAGATGCGGAAAGAGTTGCAGATTGAGATGGATTAACTACCTTCGTCCTGATCTCAAACGAGGAAATTTCACTCAAGAAGAAGACGACCTTATCATCAAGCTTCATAGTCTACTTGGAAACAAATGGTCTCTGATTGCGGCGCGATTACCTGGTAGAACCGACAATGAGATCAAGAATTATTGGAATACTCATATAAAGCGCAAGCTCATCAGCCGCGGGATCAATCCCCAAACGCACCGTCCTCTCAACGAAACCACCGCCTCTGTAAAATCCACCGCCGAGTGGGAATTCAAGACCTCGCCGGCGGCGGAAAACGACTTCCTCGTGAAGAACCAGAAGCAGGAGAGTGATAATTTCAATTTCAATTGCATCGATTTCGGAAGCATCAAGGCGGTTGAGGAATTGAACAACCCTATTAGTGGCACCACTTCAGAGGAAGAAGAACCGCCATTACCGGATCGAGATTCTTCGCTTCATGGTGGTGATGCTGGTGGTGAGCCTGATCTAGAGCTCTCGATTGGTCTCGTGCCATTTCACTCCGAGTCGGCTCGTACAGCGCTGGGGAACTTGCCCGAATCGAAGATCGGGTTGGTGCGGTCTCCGGCGACGATGGCTCAAACAGCGGCGCGTCGGAGTTGGCAATTCGATTTTCAGAGGTGGGGAAGTGTATAG 813 0.5043 MGRSPCCEKAHTNKGAWTKEEDQRLIDYIRLHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQEEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLISRGINPQTHRPLNETTASVKSTAEWEFKTSPAAENDFLVKNQKQESDNFNFNCIDFGSIKAVEELNNPISGTTSEEEEPPLPDRDSSLHGGDAGGEPDLELSIGLVPFHSESARTALGNLPESKIGLVRSPATMAQTAARRSWQFDFQRWGSV 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1782 270 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju02g1782 270 Gene3D - 14 66 - -
Alju02g1782 270 CDD SANT 69 112 IPR001005 -
Alju02g1782 270 MobiDBLite consensus disorder prediction 194 208 - -
Alju02g1782 270 FunFam MYB-related transcription factor 13 66 - -
Alju02g1782 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju02g1782 270 CDD SANT 16 61 IPR001005 -
Alju02g1782 270 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 178 - -
Alju02g1782 270 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Alju02g1782 270 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju02g1782 270 MobiDBLite consensus disorder prediction 186 213 - -
Alju02g1782 270 Gene3D - 68 141 - -
Alju02g1782 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju02g1782 270 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju02g1782 270 SMART sant 13 63 IPR001005 -
Alju02g1782 270 SMART sant 66 114 IPR001005 -
Alju02g1782 270 FunFam Myb transcription factor 68 137 - -
Alju02g1782 270 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1782 Alju-ChrAlju02 17074908 17075978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1782 1 138 MYB Transcription Factor Family AT4G38620 85.507 1.84e-87 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju02g1782 Myb_DNA-binding 2.8e-15 CL0123