Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1771 ATGGACTGCAACTGTATTGAGCCACCACCAGGGGATGAATTGTTGATGAAATACCAATATATTTCAGATTTCTTCATCGCCCTTGCTTATTTTTCAATCCCTCTAGAACTGATTTACTTTGTAAAGAAATCAGCCGTGTTTCCATATAGATGGGTACTTGTTCAGTTTGGTGCTTTCATAGTTCTATGTGGAGCAACACATCTAATAAATTTATGGACCTTCACAGTGCATTCAAAAACTGTGGCAGTCGTAATGACGACTGCTAAGGTTTTAACTGCCGTGGTATCATGTGCGACTGCCCTTTTGCTTGTACATATCATTCCTGATTTATTGAGTGTTAAGACCAGAGAGCTATTTTTGAAGAATAAGGCTGCAGAGCTTGATAGGGAAATGGGCTTGATTCGCACACAGGAAGAAACTGGTCGACATGTTAGGATGCTGACTCATGAGATTAGAAGCACTCTGGATCGACACACCATACTTAAAACAACTCTTGTTGAACTGGGTAGAACCTTGGCACTGGAGGAGTGTGCATTATGGATGCCAACGCGCACTGGGTTGGAGCTCCAACTTTCCTACACATTGAGACAGCAAAACCCAGTTGGATATACTGTACCCATCCATCTTCCTGTGATCAATCAAGTATTTAGTACAAACCAAGCAGTCAAAATTTCACCAAACTGCCCGGTAGCCAGATTGCGGCCTCATGCAGGAAAATACATGCCTGGGGAAGTAGTTGCTGTTCGAGTGCCCCTCCTAAATCTTTCTAATTTCCAAATTTATGATTGGCCGGCAGTTTCATCAAGCTATGCTTTGATGGTCTTGATGCTCCCATCAGATAGTGCAAGACAGTGGCATCTCTATGAGTTAGAGCTGGTTGAGGTTGTTGCTGATCAGGTAGCTGTTGCTCTTTCACATGCTGCAATTTTAGAAGAGTCAATGAGGGCAAGGGATAAGCTTTTGGAGCAAAATGGTGCACTTGATCGGGCAAGAAGAGAAGCAGAGACTGCAATTCGTGCTCGCAATGATTTTTTGTCAGTAATGAATCATGAGATGAGGACTCCTATGCATGCAGTTATTGCACTCTCCTCATTGTTACAAGAAACAGAGCTGACACCTGAGCAGCGTTTGATGGTTGAGACCATACTGAAAAGTAGTAATCTATTAGCTACTCTCATCAATGACGTTTTAGATCTTTCACGTCTTGAGGATGGCAGTCTTCAACTTGATGCAGCAACATTCAACCTTCATGCTGTGTTCAGAGAGGTCCTTAACTTGATCAAACCTGTCGCATCTGTCAAAAAGTTGTCACTCACTTTACATTTAGCTCCAGACTTGCCGGTGTATGCTATCGGTGATGAAAAACGCCTCATGCAAACTATTCTCAACGTTGTTGGTAATGCTGTTAAGTTCTCGAAAGAGGGTGGTGTATCCATCATTGCTTTTGTTGCAAAAGTTGAATCCTTTAGGGATGCTAGAATTCCAGACTTTATACCAGTACTTAATGATAATCAATTTTATCTGCGAGTACAGGTAAAAGATTCTGGATCAGGAATTAATCCACAAGATATACCTACATTATTTACTAAGTTTGCACAAACCCAATCTTCAACAGCAAGAAATTCTGGTGGAAATGGACTTGGCCTCGCAATTTGCAAGAGGTTTGTAAATCTTATGGAGGGGCATATTTGGATTGATAGTGAAGGTATTGGTAAGGGGTGTACAGCTACCTTCATTGTAAAACTTGGACTCCCTGATCGATCAAATGAATCTAAAGCCCCCTTTGTGCATAAGATGCTGGGAAATCATGGCCCCACAAACTTTGCAGGGCTCAAGGTTCTTGTCTTGGATGATAATGGGGTTAGCCGGACGGTAACAAAGGGACTACTTGTGCATTTAGGGTGTGATGTTACAACAGCGAGCTCAAGTGAAGAATGCTTGCGTGTTCTTTCTCATGAACACAAGGTGATCTTCATGGATGTATGTTCAGGTATAGACGGTTATGATCTCGCGGTACGTATCCACGAGAAGTTCACCAAACGTCAAGATAGGCCTCTTATTGTTTCTCTCACTGGGAACACTAACAAGGTCACAAAAGAGAACTGTGTGAGGGTTGGAATGGATGGCCTCATATTGAAACCTGTTTCTGTTGATAAGATGAGGGGTGTTTTGTCTGAACTACTAGAGCATCGGGTTTTGTTTGAAACCATTTAA 2214 0.4219 MDCNCIEPPPGDELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFTVHSKTVAVVMTTAKVLTAVVSCATALLLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLRQQNPVGYTVPIHLPVINQVFSTNQAVKISPNCPVARLRPHAGKYMPGEVVAVRVPLLNLSNFQIYDWPAVSSSYALMVLMLPSDSARQWHLYELELVEVVADQVAVALSHAAILEESMRARDKLLEQNGALDRARREAETAIRARNDFLSVMNHEMRTPMHAVIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLDAATFNLHAVFREVLNLIKPVASVKKLSLTLHLAPDLPVYAIGDEKRLMQTILNVVGNAVKFSKEGGVSIIAFVAKVESFRDARIPDFIPVLNDNQFYLRVQVKDSGSGINPQDIPTLFTKFAQTQSSTARNSGGNGLGLAICKRFVNLMEGHIWIDSEGIGKGCTATFIVKLGLPDRSNESKAPFVHKMLGNHGPTNFAGLKVLVLDDNGVSRTVTKGLLVHLGCDVTTASSSEECLRVLSHEHKVIFMDVCSGIDGYDLAVRIHEKFTKRQDRPLIVSLTGNTNKVTKENCVRVGMDGLILKPVSVDKMRGVLSELLEHRVLFETI 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1771 737 Pfam Response regulator receiver domain 613 721 IPR001789 GO:0000160
Alju02g1771 737 Gene3D - 306 404 - -
Alju02g1771 737 Gene3D - 405 589 IPR036890 -
Alju02g1771 737 ProSiteProfiles Response regulatory domain profile. 612 728 IPR001789 GO:0000160
Alju02g1771 737 FunFam Ethylene receptor 605 737 - -
Alju02g1771 737 ProSiteProfiles Histidine kinase domain profile. 347 586 IPR005467 -
Alju02g1771 737 CDD HisKA 338 401 IPR003661 GO:0000155|GO:0007165
Alju02g1771 737 PIRSF Ethylen_sen_hybr_HK 1 735 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Alju02g1771 737 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 452 582 IPR003594 -
Alju02g1771 737 SMART HisKA_10 340 405 IPR003661 GO:0000155|GO:0007165
Alju02g1771 737 Pfam GAF domain 156 304 IPR003018 GO:0005515
Alju02g1771 737 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 730 - -
Alju02g1771 737 SMART HKATPase_4 452 586 IPR003594 -
Alju02g1771 737 SUPERFAMILY CheY-like 607 729 IPR011006 -
Alju02g1771 737 FunFam Ethylene receptor 1 405 587 - -
Alju02g1771 737 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 394 582 IPR036890 -
Alju02g1771 737 FunFam Ethylene response sensor 134 305 - -
Alju02g1771 737 SMART gaf_1 156 314 IPR003018 GO:0005515
Alju02g1771 737 Gene3D - 134 305 IPR029016 -
Alju02g1771 737 Gene3D - 606 737 - -
Alju02g1771 737 SMART REC_2 611 724 IPR001789 GO:0000160
Alju02g1771 737 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 326 406 IPR036097 GO:0000155|GO:0007165
Alju02g1771 737 PRINTS Bacterial sensor protein C-terminal signature 543 561 IPR004358 GO:0016310|GO:0016772
Alju02g1771 737 PRINTS Bacterial sensor protein C-terminal signature 508 522 IPR004358 GO:0016310|GO:0016772
Alju02g1771 737 PRINTS Bacterial sensor protein C-terminal signature 526 536 IPR004358 GO:0016310|GO:0016772
Alju02g1771 737 FunFam Ethylene receptor 1 307 403 - -
Alju02g1771 737 Pfam His Kinase A (phospho-acceptor) domain 341 405 IPR003661 GO:0000155|GO:0007165
Alju02g1771 737 SUPERFAMILY GAF domain-like 156 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1771 Alju-ChrAlju02 16948842 16954078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1771 3 735 Miscellaneous Gene Families AT1G66340 80.461 0.0 1205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju02g1771 GAF 6.7e-15 CL0161