Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1739 ATGCTCCCTCTGCTTCCCTTGAAACGTCTCTTCTTTCGTCTCCGTCCTTCATCGAGGGCATTGCCTCTGTGCGTAATCGTCGCCCCCGTTGTCCAGCGCACCTCCAACTGCCACCACCGACTCCACCGTATTCATCCCAGGTTCCGTTGTCTTACCATGCTTTGTATTTCTCTTAATTTGCCAAATCTGTTTCATCGTAGAGCTCTGAGAACTGTGATGAAAAAAACCATGGCTGAGGAGGAGCCCAAGCCCTTGAACTATATTCCAGAGATTATCTTGAAGAAACGAAAAAGCAGCGAAGCATTGGCCTTGAGGAAAAAGGATCAACTTCAGCAGAAGAAGTTCCAAACAAAGAATTCCAAGGATTATATCAAAAAGCCTGAGGATTTCATCATTGAGTATCGAAACAAGGAGCTTGACCTTATTAGAATGAATCGACGGGTCAAGAGGATCAAGAAACAACCAGAGCTATTGAGGCCAAATTCAAATTCGAAGTTGTTATTAATCATTCGGATACAAGGGAAAAATGACATGAATCCAAAAACTCAAAAGGCCTTAAACAAATTGAATTTGAGAAGAATATTCAGTGCTGTCTTTGTGAAGGCAAGAGTGGGAATCATGGCAAAGCTGCAGATGGTCGAACCATATGTCACCTATGGGTATCCTAATCTTAAAACCATAAAGGAACTGATCTACAAGAAGGGGTTCGCAAAAATAGACAACCAGAAAGTTCCTCTGACAGACAATAACATTATTGAACAGGCATTAGGAAAGTATGGAATTGTGTGCATAGAAGATATGGTCCATGAAATTGTTAATGTTGGTCCACACTTCGAAGAAGTTGCCAGGTTCTTGTGGCCCTTTGAACTCAACAAACCAGCTGACTGCTTGCGAGGATCAAAAACCTTGTACAAGGATGGTGGAGACACGGGGAACCGTGAAGATCTCATCAACGAACTAATCAACAAAATGAATTAA 978 0.4223 MLPLLPLKRLFFRLRPSSRALPLCVIVAPVVQRTSNCHHRLHRIHPRFRCLTMLCISLNLPNLFHRRALRTVMKKTMAEEEPKPLNYIPEIILKKRKSSEALALRKKDQLQQKKFQTKNSKDYIKKPEDFIIEYRNKELDLIRMNRRVKRIKKQPELLRPNSNSKLLLIIRIQGKNDMNPKTQKALNKLNLRRIFSAVFVKARVGIMAKLQMVEPYVTYGYPNLKTIKELIYKKGFAKIDNQKVPLTDNNIIEQALGKYGIVCIEDMVHEIVNVGPHFEEVARFLWPFELNKPADCLRGSKTLYKDGGDTGNREDLINELINKMN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1739 325 PANTHER 60S RIBOSOMAL PROTEIN L7 85 325 IPR039699 -
Alju02g1739 325 Pfam Ribosomal protein L30p/L7e 167 217 IPR016082 -
Alju02g1739 325 Pfam Ribosomal L30 N-terminal domain 89 150 IPR012988 -
Alju02g1739 325 SUPERFAMILY Ribosomal protein L30p/L7e 166 325 IPR036919 -
Alju02g1739 325 NCBIfam 60S ribosomal protein uL30 89 325 IPR005998 GO:0000463|GO:0003735|GO:0022625
Alju02g1739 325 Coils Coil 134 154 - -
Alju02g1739 325 FunFam 60S ribosomal protein L7 166 270 - -
Alju02g1739 325 CDD Ribosomal_L7_archeal_euk 166 325 IPR035808 -
Alju02g1739 325 Gene3D - 270 325 IPR036919 -
Alju02g1739 325 Gene3D - 166 269 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1739 Alju-ChrAlju02 16483072 16486093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1739 77 325 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 57.371 2.02e-90 268