Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1731 ATGGTTGGGCTATTCCTTTTCGCTATGAGACACATTTTGTTTGAGCTAAGCTTTTTGACCTTCTTGTGTGTTGCTTTTGCTCTGAGCCCTGATGGGGTTACTCTGCTTTCACTCTCAAAGCACTGGACATTTGTGCCTCCTTCCATTAATTCAAGCTGGAATGTCTCTGATTCAACTCCATGTTCATGGGTAGGAATCCAGTGCGACGATGCTTACTGTGTAATCTCCCTTAACCTCACTTCTTTTTCTTTCTCTGGTCAATTAGGCCCTGAAATAGGACAGTTGAACAATTTGCAAACCCTTGTGCTTTATTCTAATAATCTCTCTGGAAGAATTCCCCCAGAGATAGGAAATTGTAGCGTGTTGAAGTATTTGGACCTTTCCCAAAACAACTTCACAGGAAAAATACCAAATGGCTTAGGAAATTGTAGTATGCTTGAGCACTTGGATCTTTCCGAAAACACTCTTAGTGGGGAAATTCCAGATAGCTTCAGAAGCTTACAAAAATTGCAACATTTGTACCTTCATTCCAATTGTATCCTTAACGGTGAAATTCCTGAATACTTGTTTGATTTTCCTCAGTTAGATTCTGTGCTTTTGCAAAACAACAGCCTAAGTGGTCCTATCCCAATGAATATTGGCAATAGCACCAAACTTAGGTGGTTGTATCTGTACAATAATCGATTGTCTGGGATCATACCCACGTCCATTGGAAACTGCAGTGAATTAGAGCGAGTGTTTCTAGGTGAGAACCAATTACAGGGGATTTTGCCTCAAAGTCTTAACAATCTCCAGAATCTTGAGTATCTTAGTGTCAAATACAATAAGCTTGAGGGTCCAATTCCATTAGGTTCTGGAAGTTGCAGGAGTCTATACTTTTTGGATTTGTCATACAATGTATTTAGTGGGAATATTCCTACAGGATTAAGGAATTGTAATGCCTTGGCCTACTTTTATGCTGTGAATAGCAACTTACTAGGTAACATCCCATTTTTCTTGGGCTCGCTGAGCAAACTTTCTATTCTTCACCTTTCTCTAAACCATCTGTCTGGACAAATACCTCCAGAAATTAGTCGTTGCCGGTCTTTGACAGAGTTGCATTTAGACGGAAATCAACTTGAGGGAGAAATTCCCAGTGAGTTAGGAATGCTAACTGAGTTGCAGATGTTGTATTTGTTTGACAACCAATTGACAGGTGAAATCCCAGTTAGCATATGGAAGATTCCAAGTCTTCAGTCTATTCAATTGTACAATAATAGCTTTCATGGAGAGTTACCTTTAGTAGTCACTGAGCTAAAGCAGCTGCAAAATATCTCATTGGCTGAGAACAACTTCTCTGGAGTTATACCTCACAGTTTAGGAATTAACAGTAGTTTGGTGTGGTTGGACTTGGGAAATAACAAGTTTACCGGCCAACTCCCTCCGAATCTTTGCTTTGGAATGGAATTAGAAAGGTTAATTGTGGGTGATAATCAACTGCAAGGTAGAATACCATCCAGCATAGGAGGTTGTACAAGTCTTAAAAGGTTGATTCTCAAATCAAATAATTTTACAGGACCCCTTCCTGCTTTTGAAAATAATATGAGTCTTGAATACATGAACATGGGCAGTAATAGCATCAGTGAAACAATTCCATCTAGTTTAGGGAATTGCAAAAGCCTCACTTATATTAATTTGTCCATGAACAAACTTGTAGGACTCATACCACCAGAGTTGGGAAACCTTGTAAACCTTCACGAGTTGCATCTTTCTTATAACAATTTGGAAGGTCCTTTGCCATCTAACCTGTCAAACTGTATCAAAATGGAAAAATTTGATGTGGGGTTCAATTACTTGAATGGTTCATTTCCATCAAGTTTGAGTGCTTGGACAGGTCTATCAACTTTGAACTTAAGAGAGAATCATTTCACTGGGGGTATCCCAATATTCTTATCAGGATTTCAAAAGCTTTTTGACCTACAGCTTGGGGGCAATTCATTTGGAGGTGAAATTCCTAGCTCAATTGGATCACTGCAGAATCTACAATATGGATTGAATCTCAGTGCTAATGGACTAATAGGTGAGATTCCATTGGAGATTGGGAAGCTGAAAATGCTCCAAAGATTGGATTTGTCACTAAACAATTTGTCCAAAAGCATAGAAGTTCTAGAACAACTTTCTTCACTGGATGAAGTTAATATCTCATTCAATTCCTTTGTTGGTCCTGTGCCGAATAGACTGATGAAGTTTAATCAATCATCATTCTTGGGTAATCCTGGGTTATGCATTAATTGTTTTTCCTTTGATAGCCTAAATTGCCCAAAGAATGTCGGTTTGAGACCTTGTGGCCACAAATCAGGTCATCATAAAGGATTGAGTAAGTTGAAAATCATAGCAATATCGGCTGGATCTTCCTTTTTCATTATTCTTTTGGTGCTAGGACTAGCTTTCACGCTTCTCCTTGGCAAAAGATCTCAGCAAGATATCAGAATCTTTCCAAGTCATGGTTCATCTTCACTTCTCAAGAAAATCATGAATGCTACAGGAAACCTAAACGATCGGTATATAATTGGCAAAGGTGCTCATGGAGTTGTCTATAAAGTTTCACTAGATCCTAAAAAGGTCTTTGCTTTGAAGAAATTTCCATTTGCTCACGACAAGGGACAAAGCAATAGCATGAGCAGAGAACTTGAAACCATAGGGAAGATTAAGCATCGAAATCTGGTAAGATTGGAGAACTTCTGGTTGCGAAAGGACTGTGGCTTGATCATGTACACCTTCATGCAAAATGGAAGCCTTCATGATGTTCTGCATGAAACAAATCCGCCACCATTTTTGTTGTGGAGTGTTCGCTATAAGATAGCCTTTGGAATTGCTCAAGGACTAGCATATCTCCATTTCGACTGCGATCCGGTCATAGTACATCGTGACATCAAATCAAGCAATATCCTTTTAGATTCTGACATGGAGCCTCACATTGCTGATTTTGGCATTGCCAAGGTTTTGAATCAATCCTCTACTGCAATGATGTCTATGGTTGTTCCTGGTACAATGGGGTATATTGCACCAGAGAACGCATTTTCAGTTGTAGTGAGCAGAAAATCTGATGTGTATAGTTATGGAGTAGTTTTGCTTGAGCTGCTAACCAGAAAGAAGGTGTTGGATGCTTCATTTATGGAGGGGGGAACAGATATCGTGGGGTGGGTCAGATCTGTATGGGAAGAATCAAGAGAAATTAAAGGGATTGTTGATCCAATCCTTTGTGATGAATTTAGGGTTTCTAATGTAAGGGAAGAAGTTGAACAAGTGCTTTTGGTGGCTCTGAGATGTACTGAGAATGATCCAAGAATGAGACCAACAATGAGAGAAGTCATCAGCAATTTGATTATTAGAAGCAAAGCTTGTGGCAATGAAATTGTAAAAGCTTGA 3408 0.392 MVGLFLFAMRHILFELSFLTFLCVAFALSPDGVTLLSLSKHWTFVPPSINSSWNVSDSTPCSWVGIQCDDAYCVISLNLTSFSFSGQLGPEIGQLNNLQTLVLYSNNLSGRIPPEIGNCSVLKYLDLSQNNFTGKIPNGLGNCSMLEHLDLSENTLSGEIPDSFRSLQKLQHLYLHSNCILNGEIPEYLFDFPQLDSVLLQNNSLSGPIPMNIGNSTKLRWLYLYNNRLSGIIPTSIGNCSELERVFLGENQLQGILPQSLNNLQNLEYLSVKYNKLEGPIPLGSGSCRSLYFLDLSYNVFSGNIPTGLRNCNALAYFYAVNSNLLGNIPFFLGSLSKLSILHLSLNHLSGQIPPEISRCRSLTELHLDGNQLEGEIPSELGMLTELQMLYLFDNQLTGEIPVSIWKIPSLQSIQLYNNSFHGELPLVVTELKQLQNISLAENNFSGVIPHSLGINSSLVWLDLGNNKFTGQLPPNLCFGMELERLIVGDNQLQGRIPSSIGGCTSLKRLILKSNNFTGPLPAFENNMSLEYMNMGSNSISETIPSSLGNCKSLTYINLSMNKLVGLIPPELGNLVNLHELHLSYNNLEGPLPSNLSNCIKMEKFDVGFNYLNGSFPSSLSAWTGLSTLNLRENHFTGGIPIFLSGFQKLFDLQLGGNSFGGEIPSSIGSLQNLQYGLNLSANGLIGEIPLEIGKLKMLQRLDLSLNNLSKSIEVLEQLSSLDEVNISFNSFVGPVPNRLMKFNQSSFLGNPGLCINCFSFDSLNCPKNVGLRPCGHKSGHHKGLSKLKIIAISAGSSFFIILLVLGLAFTLLLGKRSQQDIRIFPSHGSSSLLKKIMNATGNLNDRYIIGKGAHGVVYKVSLDPKKVFALKKFPFAHDKGQSNSMSRELETIGKIKHRNLVRLENFWLRKDCGLIMYTFMQNGSLHDVLHETNPPPFLLWSVRYKIAFGIAQGLAYLHFDCDPVIVHRDIKSSNILLDSDMEPHIADFGIAKVLNQSSTAMMSMVVPGTMGYIAPENAFSVVVSRKSDVYSYGVVLLELLTRKKVLDASFMEGGTDIVGWVRSVWEESREIKGIVDPILCDEFRVSNVREEVEQVLLVALRCTENDPRMRPTMREVISNLIIRSKACGNEIVKA 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1731 1135 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 812 920 - -
Alju02g1731 1135 SMART serkin_6 844 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1731 1135 ProSiteProfiles Leucine-rich repeat profile. 698 720 IPR001611 GO:0005515
Alju02g1731 1135 SUPERFAMILY Protein kinase-like (PK-like) 823 1123 IPR011009 -
Alju02g1731 1135 Coils Coil 699 719 - -
Alju02g1731 1135 SUPERFAMILY RNI-like 377 728 - -
Alju02g1731 1135 Gene3D Ribonuclease Inhibitor 455 763 IPR032675 -
Alju02g1731 1135 Gene3D Ribonuclease Inhibitor 314 454 IPR032675 -
Alju02g1731 1135 FunFam Serine/threonine-protein kinase-like protein CCR4 921 1134 - -
Alju02g1731 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 966 978 IPR008271 GO:0004672|GO:0006468
Alju02g1731 1135 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Alju02g1731 1135 SUPERFAMILY L domain-like 30 330 - -
Alju02g1731 1135 Gene3D Ribonuclease Inhibitor 29 178 IPR032675 -
Alju02g1731 1135 Pfam Leucine rich repeat 218 277 IPR001611 GO:0005515
Alju02g1731 1135 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Alju02g1731 1135 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515
Alju02g1731 1135 Gene3D Phosphorylase Kinase; domain 1 810 920 - -
Alju02g1731 1135 Gene3D Ribonuclease Inhibitor 179 240 IPR032675 -
Alju02g1731 1135 Gene3D Ribonuclease Inhibitor 241 313 IPR032675 -
Alju02g1731 1135 SMART LRR_typ_2 336 360 IPR003591 -
Alju02g1731 1135 SMART LRR_typ_2 95 119 IPR003591 -
Alju02g1731 1135 SMART LRR_typ_2 575 599 IPR003591 -
Alju02g1731 1135 SMART LRR_typ_2 167 192 IPR003591 -
Alju02g1731 1135 SMART LRR_typ_2 217 239 IPR003591 -
Alju02g1731 1135 SMART LRR_typ_2 240 263 IPR003591 -
Alju02g1731 1135 SMART LRR_typ_2 457 480 IPR003591 -
Alju02g1731 1135 SMART LRR_typ_2 384 408 IPR003591 -
Alju02g1731 1135 SMART LRR_typ_2 264 288 IPR003591 -
Alju02g1731 1135 SMART LRR_typ_2 696 719 IPR003591 -
Alju02g1731 1135 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 28 177 - -
Alju02g1731 1135 ProSiteProfiles Protein kinase domain profile. 844 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1731 1135 Gene3D Transferase(Phosphotransferase) domain 1 921 1130 - -
Alju02g1731 1135 Pfam Protein kinase domain 849 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1731 1135 ProSitePatterns Protein kinases ATP-binding region signature. 850 872 IPR017441 GO:0005524
Alju02g1731 1135 FunFam Leucine-rich repeat receptor-like protein kinase TDR 178 416 - -
Alju02g1731 1135 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 440 766 - -
Alju02g1731 1135 Pfam Leucine Rich repeat 360 376 IPR001611 GO:0005515
Alju02g1731 1135 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 526 1121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1731 Alju-ChrAlju02 16430430 16433922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1731 20 1134 Receptor kinase-like Gene Family AT1G73080 49.779 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju02g1731 Pkinase 1.1e-42 CL0016